RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 SLAMF1Q13291 335 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 IL18R1Q13478 541 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 LRRC26Q2I0M4 334 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 SERPINA13PQ6UXR4 307 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 ZNF852Q6ZMS4 543 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 RBFAQ8N0V3 343 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 CAMKK1Q8N5S9 505 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 HJURPQ8NCD3 748 aaPredicted RBP11.97□□□□□ -0.49
HDAC4-208ENST00000463007 B3GNT7Q8NFL0 401 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 OR10G2Q8NGC3 310 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 GPR151Q8TDV0 419 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 TXNDC15Q96J42 360 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 GIMAP4Q9NUV9 329 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 RPS6KA6Q9UK32 745 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 INSL5Q9Y5Q6 135 aa11.97□□□□□ -0.49
HDAC4-208ENST00000463007 OR2AG2A6NM03 316 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 SH3BP5O60239 455 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 C9P02748 559 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 WEE1P30291 646 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 SOX6P35712 828 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 RGS6P49758 472 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 HNRNPFP52597 415 aaKnown RBP11.96□□□□□ -0.49
HDAC4-208ENST00000463007 AP1S1P61966 158 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 SMAD3P84022 425 aaKnown RBP11.96□□□□□ -0.49
HDAC4-208ENST00000463007 IRF8Q02556 426 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 IRF3Q14653 427 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 EXOC3L2Q2M3D2 409 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 PTOV1Q86YD1 416 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 GALNT12Q8IXK2 581 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 ZZZ3Q8IYH5 903 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 SLC34A3Q8N130 599 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 LGI4Q8N135 537 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 C17orf50Q8WW18 174 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 MYDGFQ969H8 173 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 TRPV5Q9NQA5 729 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 TBX21Q9UL17 535 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 OARD1Q9Y530 152 aa11.96□□□□□ -0.49
HDAC4-208ENST00000463007 GLYATL1P3A0A0U1RQE8 302 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 WNT9AO14904 365 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 PCDH17O14917 1159 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 SNX4O95219 450 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 SOAT1P35610 550 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 GZMMP51124 257 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 ACSM2AQ08AH3 577 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 PPIGQ13427 754 aaKnown RBP eCLIP11.96□□□□□ -0.59e-9■■□□□ 13.7
HDAC4-208ENST00000463007 CDH18Q13634 790 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 KEAP1Q14145 624 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 ZNF181Q2M3W8 571 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 XKR6Q5GH73 641 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 COX20Q5RI15 118 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 ACSM2BQ68CK6 577 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 RNF165Q6ZSG1 346 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 SZRD1Q7Z422 152 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 ZSWIM9Q86XI8 627 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 MEX3DQ86XN8 651 aaKnown RBP11.96□□□□□ -0.5
HDAC4-208ENST00000463007 TMC8Q8IU68 726 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 APCDD1Q8J025 514 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 STK40Q8N2I9 435 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.5
HDAC4-208ENST00000463007 DTX3Q8N9I9 347 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 PKP4Q99569 1192 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 MAGIXQ9H6Y5 334 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 DNAJC27Q9NZQ0 273 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 NUFIP1Q9UHK0 495 aaKnown RBP11.96□□□□□ -0.5
HDAC4-208ENST00000463007 MAFFQ9ULX9 164 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 TMEM98Q9Y2Y6 226 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 PCDHGB1Q9Y5G3 927 aa11.96□□□□□ -0.5
HDAC4-208ENST00000463007 TRBV5-3A0A0A0MS03 114 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CXorf51AA0A1B0GTR3 108 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CLCA1A8K7I4 914 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 HAT1O14929 419 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-208ENST00000463007 ADRA2AP08913 450 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 LINC00271P0C7V0 271 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 BPIP17213 487 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 PTPN6P29350 595 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 PBLDP30039 288 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-208ENST00000463007 TNFSF8P32971 234 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 PRIM2P49643 509 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 SNRPD2P62316 118 aaKnown RBP11.95□□□□□ -0.5
HDAC4-208ENST00000463007 DOC2BQ14184 412 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 UGT8Q16880 541 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CNKSR3Q6P9H4 555 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CALHM3Q86XJ0 350 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 LAX1Q8IWV1 398 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 C2orf73Q8N5S3 287 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-208ENST00000463007 MYO19Q96H55 970 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 VPS35Q96QK1 796 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 MGLLQ99685 303 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 SP140LQ9H930 580 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 RANGRFQ9HD47 186 aaPredicted RBP11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CTPS2Q9NRF8 586 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 FBXL12Q9NXK8 326 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 TAS2R9Q9NYW1 312 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CLEC2DQ9UHP7 191 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 RAB23Q9ULC3 237 aa11.95□□□□□ -0.5
HDAC4-208ENST00000463007 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms