RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZFP69BQ9UJL9 534 aa14.46□□□□□ -0.09
SKA3-204ENST00000462482 CORO1CQ9ULV4 474 aaPredicted RBP14.46□□□□□ -0.09
SKA3-204ENST00000462482 CROCCQ5TZA2 2017 aa14.46□□□□□ -0.1
SKA3-204ENST00000462482 FCHO1O14526 889 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 PRRG2O14669 202 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 ASNA1O43681 348 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 SLC25A12O75746 678 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 CLDN14O95500 239 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 ZNF888P0CJ79 500 aaPredicted RBP14.45□□□□□ -0.1
SKA3-204ENST00000462482 ZNF24P17028 368 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 CDKN2DP55273 166 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 BBS9Q3SYG4 887 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 RBM20Q5T481 1227 aaKnown RBP14.45□□□□□ -0.1
SKA3-204ENST00000462482 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.45□□□□□ -0.1
SKA3-204ENST00000462482 CNTRLQ7Z7A1 2325 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 STRA8Q7Z7C7 330 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 AFAP1L2Q8N4X5 818 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 TRPV3Q8NET8 790 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 OR4K1Q8NGD4 311 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 OR56A3Q8NH54 315 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 NT5CQ8TCD5 201 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 SLC5A11Q8WWX8 675 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 FBXL8Q96CD0 374 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 MTFMTQ96DP5 389 aaKnown RBP14.45□□□□□ -0.1
SKA3-204ENST00000462482 FRMD6Q96NE9 622 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 AIF1LQ9BQI0 150 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 DEFB126Q9BYW3 111 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 CELSR2Q9HCU4 2923 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 NEU2Q9Y3R4 380 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 ABCA12Q86UK0 2595 aa14.45□□□□□ -0.1
SKA3-204ENST00000462482 CACNA1DQ01668 2161 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 GUCA1CO95843 209 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 TSPAN12O95859 305 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 AHSGP02765 367 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 RNH1P13489 461 aaKnown RBP14.44□□□□□ -0.1
SKA3-204ENST00000462482 SSTR2P30874 369 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 AHRP35869 848 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 ST13P50502 369 aaKnown RBP14.44□□□□□ -0.1
SKA3-204ENST00000462482 OLR1P78380 273 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 ADORA2A-AS1P86434 159 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 RNASEH2BQ5TBB1 312 aaKnown RBP14.44□□□□□ -0.1
SKA3-204ENST00000462482 HECTD2Q5U5R9 776 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 FAM45BPQ6NSW5 357 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 Q6ZPB1 254 aaPredicted RBP14.44□□□□□ -0.1
SKA3-204ENST00000462482 QSOX2Q6ZRP7 698 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 GALNT7Q86SF2 657 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 CNTN4Q8IWV2 1026 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 AGGF1Q8N302 714 aaeCLIP14.44□□□□□ -0.1
SKA3-204ENST00000462482 POGLUT1Q8NBL1 392 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 FAM45AQ8TCE6 357 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 ELP5Q8TE02 316 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 CERS2Q96G23 380 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 NPAS2Q99743 824 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 OLFM1Q99784 485 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 RHBGQ9H310 441 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 ZNF835Q9Y2P0 537 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 MEMO1Q9Y316 297 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 VWA7Q9Y334 891 aa14.44□□□□□ -0.1
SKA3-204ENST00000462482 DOCK10Q96BY6 2186 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 MAN1A2O60476 641 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 NEURL1O76050 574 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 GABRB3P28472 473 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 TPP2P29144 1249 aaPredicted RBP14.43□□□□□ -0.1
SKA3-204ENST00000462482 HNF4AP41235 474 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 SCTRP47872 440 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 TIAL1Q01085 375 aaKnown RBP eCLIP14.43□□□□□ -0.1
SKA3-204ENST00000462482 RBBP5Q15291 538 aaKnown RBP14.43□□□□□ -0.1
SKA3-204ENST00000462482 CATSPEREQ5SY80 951 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 SHISA5Q8N114 240 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 PDIK1LQ8N165 341 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 ACTRT1Q8TDG2 376 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 NEIL2Q969S2 332 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 FAR2Q96K12 515 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 LURAP1Q96LR2 239 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 TSNARE1Q96NA8 513 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 PELI2Q9HAT8 420 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 PRDM9Q9NQV7 894 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 COQ3Q9NZJ6 369 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 KLF13Q9Y2Y9 288 aaPredicted RBP14.43□□□□□ -0.1
SKA3-204ENST00000462482 KCNE2Q9Y6J6 123 aa14.43□□□□□ -0.1
SKA3-204ENST00000462482 SAGE2PA6NJ88 616 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 KLRC4-KLRK1H3BQV0 150 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 DNALI1O14645 258 aaPredicted RBP14.42□□□□□ -0.1
SKA3-204ENST00000462482 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
SKA3-204ENST00000462482 NME2P1O60361 137 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 H2AFYO75367 372 aaKnown RBP14.42□□□□□ -0.1
SKA3-204ENST00000462482 NME2P22392 152 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 HLCSP50747 726 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 MLF1P58340 268 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 RAB8AP61006 207 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 CCZ1BP86790 482 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 CCZ1P86791 482 aaPredicted RBP14.42□□□□□ -0.1
SKA3-204ENST00000462482 TMPRSS11BQ86T26 416 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 SIAH3Q8IW03 269 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 KIF2BQ8N4N8 673 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 ADAMTS18Q8TE60 1221 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 UTP15Q8TED0 518 aaKnown RBP14.42□□□□□ -0.1
SKA3-204ENST00000462482 AGAP11Q8TF27 550 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 CHTF18Q8WVB6 975 aa14.42□□□□□ -0.1
SKA3-204ENST00000462482 CFAP36Q96G28 342 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms