RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 RAE1P78406 368 aaKnown RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 XKR6Q5GH73 641 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 ZMAT1Q5H9K5 638 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 ZNF648Q5T619 568 aaPredicted RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 CRTC1Q6UUV9 634 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 SERPINA13PQ6UXR4 307 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 TMC5Q6UXY8 1006 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 BBS7Q8IWZ6 715 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 CBARPQ8N350 705 aaPredicted RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 CCDC32Q9BV29 185 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 CCDC177Q9NQR7 707 aaPredicted RBP17.74■□□□□ 0.43
HPS3-204ENST00000462030 NPAP1Q9NZP6 1156 aa17.74■□□□□ 0.43
HPS3-204ENST00000462030 E7EQ34 232 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 PCDH17O14917 1159 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 SMARCB1Q12824 385 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 IFI44LQ53G44 452 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 TRAF7Q6Q0C0 670 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 C1orf52Q8N6N3 182 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 FBXO22Q8NEZ5 403 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 C17orf50Q8WW18 174 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 C11orf24Q96F05 449 aaPredicted RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 DMRTB1Q96MA1 342 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 SMURF1Q9HCE7 757 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 SPATA6Q9NWH7 488 aaPredicted RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 BTNL2Q9UIR0 455 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 OGDHLQ9ULD0 1010 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 FAM172BPA6NC97 362 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 H3BM21 787 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 CCRL2O00421 344 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 CAPN5O15484 640 aaPredicted RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 GUCY1B2O75343 617 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 PCSK2P16519 638 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 CXCR2P25025 360 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 MVDP53602 400 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 RACK1P63244 317 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 TEKQ02763 1124 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 GPR50Q13585 617 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 PTGES3Q15185 160 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 OR4A15Q8NGL6 344 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 WDR36Q8NI36 951 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 C2orf15Q8WU43 125 aaKnown RBP17.73■□□□□ 0.43
HPS3-204ENST00000462030 TCF25Q9BQ70 676 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 TRPM5Q9NZQ8 1165 aa17.73■□□□□ 0.43
HPS3-204ENST00000462030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 SEMA3DO95025 777 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 IDSP22304 550 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 C21orf58P58505 322 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 PLD1Q13393 1074 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 TEAD4Q15561 434 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 C2orf69Q8N8R5 385 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 BCL7CQ8WUZ0 217 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 MCCC1Q96RQ3 725 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 FAM129BQ96TA1 746 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 CNPPD1Q9BV87 410 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 CDCA4Q9BXL8 241 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 WDR70Q9NW82 654 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 SH3BP4Q9P0V3 963 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 FAM8A1Q9UBU6 413 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 MUTYHQ9UIF7 546 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 BOLA1Q9Y3E2 137 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 ANAPC1Q9H1A4 1944 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 RGS5O15539 181 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 MTX2O75431 263 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 SLITRK5O94991 958 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 ANXA4P09525 319 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 RFX2P48378 723 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 DOC2AQ14183 400 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 GANABQ14697 944 aaKnown RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 STARD3Q14849 445 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 ZNF385BQ569K4 471 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 GPR156Q8NFN8 814 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 VANGL1Q8TAA9 524 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 C9orf43Q8TAL5 461 aaPredicted RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 GPR151Q8TDV0 419 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 ASIC4Q96FT7 647 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 ST6GAL2Q96JF0 529 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 TAPBPLQ9BX59 468 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 BARHL1Q9BZE3 327 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 PRM3Q9NNZ6 103 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 EXOSC4Q9NPD3 245 aaKnown RBP17.72■□□□□ 0.43
HPS3-204ENST00000462030 TAS2R9Q9NYW1 312 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 KLHL42Q9P2K6 505 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 TMPRSS11EQ9UL52 423 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 CORO2BQ9UQ03 480 aa17.72■□□□□ 0.43
HPS3-204ENST00000462030 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 H7C4K7 107 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 GFYI3L273 518 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 SEPT4O43236 478 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 CYP2A7P20853 494 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 PPIBP23284 216 aaKnown RBP17.71■□□□□ 0.43
HPS3-204ENST00000462030 AZGP1P25311 298 aaKnown RBP17.71■□□□□ 0.43
HPS3-204ENST00000462030 SMAD3P84022 425 aaKnown RBP17.71■□□□□ 0.43
HPS3-204ENST00000462030 TIMM50Q3ZCQ8 353 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 TOR1AIP1Q5JTV8 583 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 LIPJQ5W064 366 aa17.71■□□□□ 0.43
HPS3-204ENST00000462030 ZNF517Q6ZMY9 492 aaPredicted RBP17.71■□□□□ 0.43
HPS3-204ENST00000462030 NFKBIDQ8NI38 313 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms