RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	CDK2AP1	O14519	115 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	ESR1	P03372	595 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	FOSL1	P15407	271 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	IL10	P22301	178 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	STIP1	P31948	543 aa	Known RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	CYLC1	P35663	651 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TBPL1	P62380	186 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	BTG2	P78543	158 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	MPP1	Q00013	466 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	PLGLB1	Q02325	96 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	HYAL2	Q12891	473 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TBX2	Q13207	712 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	GXYLT1	Q4G148	440 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	RNF187	Q5TA31	235 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	ZNF585A	Q6P3V2	769 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	PEX26	Q7Z412	305 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	UBL4B	Q8N7F7	174 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	LRRC57	Q8N9N7	239 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TC2N	Q8N9U0	490 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	ALKBH8	Q96BT7	664 aa	Known RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TBC1D20	Q96BZ9	403 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TM4SF19	Q96DZ7	209 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	THAP11	Q96EK4	314 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	DEPP	Q9NTK1	212 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	FBXW2	Q9UKT8	454 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	ZNF148	Q9UQR1	794 aa		12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	FLNA	P21333	2647 aa	Known RBP	12.84	□□□□□ -0.35
PABPC4-208	ENST00000461578	TRBV11-1	A0A0K0K1C0	115 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PINLYP	A6NC86	204 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PFDN6	O15212	129 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	CHST10	O43529	356 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	LIAS	O43766	372 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	FTCD	O95954	541 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	SLC35G6	P0C7Q6	338 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZSCAN5DP	P0CG00	497 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	MAOA	P21397	527 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	JAK1	P23458	1154 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	HRH2	P25021	359 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZFP36L2	P47974	494 aa	Known RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	CLCN7	P51798	805 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PPIA	P62937	165 aa	Known RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	SNX1	Q13596	522 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	OASL	Q15646	514 aa	Known RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	DEFB134	Q4QY38	66 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PAOX	Q6QHF9	649 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ARSK	Q6UWY0	536 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	LIX1L	Q8IVB5	337 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	CCDC170	Q8IYT3	715 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PRELID2	Q8N945	189 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	FBXO15	Q8NCQ5	510 aa	Predicted RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZNF740	Q8NDX6	193 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	MYRIP	Q8NFW9	859 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	GOT1L1	Q8NHS2	421 aa	Predicted RBP	12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	GIMAP7	Q8NHV1	300 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ASB11	Q8WXH4	323 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	ALPK1	Q96QP1	1244 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	PANX2	Q96RD6	677 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	TTYH2	Q9BSA4	534 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	SYBU	Q9NX95	663 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	KCMF1	Q9P0J7	381 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578	SLC22A7	Q9Y694	548 aa		12.83	□□□□□ -0.36
PABPC4-208	ENST00000461578		A0A0G2JNJ9	132 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	NDUFS4	O43181	175 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZBTB14	O43829	449 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	GALR3	O60755	368 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	ITGA10	O75578	1167 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	SERPIND1	P05546	499 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	CDH1	P12830	882 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	MGAT1	P26572	445 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	ACVR2A	P27037	513 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	MEF2A	Q02078	507 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	HERC3	Q15034	1050 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	TTLL9	Q3SXZ7	439 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	UBE2R2	Q712K3	238 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	C17orf64	Q86WR6	236 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	CDC20B	Q86Y33	519 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	CCDC89	Q8N998	374 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	NFAM1	Q8NET5	270 aa	Predicted RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	WFDC11	Q8NEX6	87 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	C1orf54	Q8WWF1	131 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	SREK1	Q8WXA9	508 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	CALR3	Q96L12	384 aa	Known RBP	12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	SMC6	Q96SB8	1091 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	IL22	Q9GZX6	179 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	LACRT	Q9GZZ8	138 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	ATG10	Q9H0Y0	220 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	RHBG	Q9H310	441 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	TIMMDC1	Q9NPL8	285 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	RASSF1	Q9NS23	344 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	BFAR	Q9NZS9	450 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	CRIM1	Q9NZV1	1036 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578		Q9UFV3	132 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	ERVK-11	Q9UQG0	969 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	FAM215A	Q9Y5M1	114 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578	LIPG	Q9Y5X9	500 aa		12.82	□□□□□ -0.36
PABPC4-208	ENST00000461578		A0A0G2JMM0	328 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms