RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KIF1CO43896 1103 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 KCNJ13O60928 360 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 KLF8O95600 359 aaPredicted RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 TPP2P29144 1249 aaPredicted RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 SERPINB1P30740 379 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 DCTP40126 519 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 HBA1P69905 142 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 CTBSQ01459 385 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 DEPDC1Q5TB30 811 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 KHDRBS2Q5VWX1 349 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 CBLL1Q75N03 491 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 EIF3MQ7L2H7 374 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 RAB42Q8N4Z0 105 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 PJA1Q8NG27 643 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 NCSTNQ92542 709 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D20Q96BZ9 403 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 CAMK1GQ96NX5 476 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 APOOQ9BUR5 198 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 SORBS1Q9BX66 1292 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 ZNF717Q9BY31 904 aaPredicted RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 PITHD1Q9GZP4 211 aaPredicted RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 RBM38Q9H0Z9 239 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 SUFUQ9UMX1 484 aa19.37■□□□□ 0.69
CCM2-203ENST00000461377 RANBP2P49792 3224 aaKnown RBP19.37■□□□□ 0.69
CCM2-203ENST00000461377 TRIM64CA6NLI5 447 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 PLPP1O14494 284 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 C6orf47O95873 294 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 IL3P08700 152 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 NUDT7P0C024 238 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 SPIDRQ14159 915 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 PRSS53Q2L4Q9 553 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 ZIK1Q3SY52 487 aaPredicted RBP19.36■□□□□ 0.69
CCM2-203ENST00000461377 SPESP1Q6UW49 350 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 TMEM179BQ7Z7N9 219 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 HS3ST5Q8IZT8 346 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 CIDECQ96AQ7 238 aaPredicted RBP19.36■□□□□ 0.69
CCM2-203ENST00000461377 DGCR14Q96DF8 476 aaKnown RBP19.36■□□□□ 0.69
CCM2-203ENST00000461377 RBM4BQ9BQ04 359 aaKnown RBP19.36■□□□□ 0.69
CCM2-203ENST00000461377 RBM4Q9BWF3 364 aaKnown RBP19.36■□□□□ 0.69
CCM2-203ENST00000461377 SMURF2Q9HAU4 748 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 IL1RAPQ9NPH3 570 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 SPASTQ9UBP0 616 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 PLEKHM1Q9Y4G2 1056 aa19.36■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3DA0A087WVF3 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3IA0A087WXS9 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3EA0A087X179 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3KA0A087X1G2 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3FA6NER0 549 aaPredicted RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3LB9A6J9 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3HP0C7X1 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 MAT2AP31153 395 aaKnown RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 PCGF2P35227 344 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 ALDH3B2P48448 385 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 MVDP53602 400 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 BIRC2Q13490 618 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3GQ6DHY5 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3CQ6IPX1 549 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 RBM44Q6ZP01 1051 aaKnown RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 TBC1D3Q8IZP1 549 aaPredicted RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 FZD3Q9NPG1 666 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 CLDND1Q9NY35 253 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TUBA8Q9NY65 449 aaPredicted RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 LMCD1Q9NZU5 365 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 SCML1Q9UN30 329 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 AP1M2Q9Y6Q5 423 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 REV3LO60673 3130 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 H7BY64 318 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 SEC24DO94855 1032 aaPredicted RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 BMP10O95393 424 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 FESP07332 822 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 PKLRP30613 574 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 RAB28P51157 221 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 CYP4F2P78329 520 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 EPS8Q12929 822 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 CLCA4Q14CN2 919 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 ZNF852Q6ZMS4 543 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 EP400NLQ6ZTU2 488 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 GALNT10Q86SR1 603 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TRIML2Q8N7C3 387 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 ZFP28Q8NHY6 868 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 SCARF2Q96GP6 870 aaPredicted RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 PRAP1Q96NZ9 151 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 TOR3AQ9H497 397 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 IMP3Q9NV31 184 aaKnown RBP19.35■□□□□ 0.69
CCM2-203ENST00000461377 GPATCH2Q9NW75 528 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 VNN3Q9NY84 501 aa19.35■□□□□ 0.69
CCM2-203ENST00000461377 FEZF1A0PJY2 475 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 CACNB4O00305 520 aaPredicted RBP19.34■□□□□ 0.69
CCM2-203ENST00000461377 NTRK1P04629 796 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 GSTT1P30711 240 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 CDH15P55291 814 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 PPP2CBP62714 309 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 PPP2CAP67775 309 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 CCNYL2Q5T2Q4 361 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 BORAQ6PGQ7 559 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 HIPK1Q86Z02 1210 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 NAGSQ8N159 534 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 OR52N2Q8NGI0 321 aa19.34■□□□□ 0.69
CCM2-203ENST00000461377 ASB12Q8WXK4 309 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms