RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CPSF6Q16630 551 aaKnown RBP eCLIP21.35■■□□□ 1.01
C9orf3-209ENST00000460573 NKAIN1Q4KMZ8 207 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 C1orf189Q5VU69 101 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 FRMD7Q6ZUT3 714 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ABHD13Q7L211 337 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 HOMEZQ8IX15 550 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 OR4F6Q8NGB9 312 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF473Q8WTR7 871 aaKnown RBP21.35■■□□□ 1.01
C9orf3-209ENST00000460573 CCT6BQ92526 530 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 MOCOSQ96EN8 888 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 RNF31Q96EP0 1072 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 CNDP1Q96KN2 507 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ATP6V1G3Q96LB4 118 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 CDK15Q96Q40 435 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 MACROD1Q9BQ69 325 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 TRMOQ9BU70 441 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 GPR87Q9BY21 358 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ANKHQ9HCJ1 492 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF304Q9HCX3 659 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 PSD3Q9NYI0 1048 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 KCND3Q9UK17 655 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 SPTBP11277 2137 aa21.35■■□□□ 1.01
C9orf3-209ENST00000460573 LOC101059948A0A1B0GTJ6 334 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 C9J4A7 227 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 BIRC5O15392 142 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 NSA2O95478 260 aaKnown RBP21.34■■□□□ 1.01
C9orf3-209ENST00000460573 STATHP02808 62 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 PCNAP12004 261 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 HYAL2Q12891 473 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 ZRSR2Q15696 482 aaKnown RBP21.34■■□□□ 1.01
C9orf3-209ENST00000460573 FAM199XQ6PEV8 388 aaPredicted RBP21.34■■□□□ 1.01
C9orf3-209ENST00000460573 GPRIN3Q6ZVF9 776 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 ZNF605Q86T29 641 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 WBP1Q96G27 269 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 CHST8Q9H2A9 424 aa21.34■■□□□ 1.01
C9orf3-209ENST00000460573 AKIRIN1Q9H9L7 192 aaPredicted RBP21.34■■□□□ 1.01
C9orf3-209ENST00000460573 IFT80Q9P2H3 777 aaPredicted RBP21.34■■□□□ 1.01
C9orf3-209ENST00000460573 LOC400499M0QZD8 3231 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 LRIT2A6NDA9 550 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 H0YIG0 161 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 PPP6CO00743 305 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 FOXS1O43638 330 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 MED26O95402 600 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 ALBP02768 609 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 ALOX12P18054 663 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 TSPAN8P19075 237 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 SERPINB5P36952 375 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 DLSTP36957 453 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 SERPINB4P48594 390 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 RPS15P62841 145 aaKnown RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 ADPRMQ3LIE5 342 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 TTC19Q6DKK2 380 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 VN1R5Q7Z5H4 357 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 VASH2Q86V25 355 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 NUDCD3Q8IVD9 361 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 AFAP1L2Q8N4X5 818 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 SRFBP1Q8NEF9 429 aaKnown RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 WDR20Q8TBZ3 569 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 CT55Q8WUE5 264 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 GAL3ST3Q96A11 431 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 FKBP10Q96AY3 582 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 ARL8AQ96BM9 186 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 MMABQ96EY8 250 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 CMTM7Q96FZ5 175 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 GATA5Q9BWX5 397 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 SLC29A3Q9BZD2 475 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 GPN2Q9H9Y4 310 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 CLK4Q9HAZ1 481 aaKnown RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 GPN3Q9UHW5 284 aaPredicted RBP21.33■■□□□ 1.01
C9orf3-209ENST00000460573 CROTQ9UKG9 612 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 PPT2Q9UMR5 302 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 SNX6Q9UNH7 406 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 PCDHGA6Q9Y5G7 932 aa21.33■■□□□ 1.01
C9orf3-209ENST00000460573 BAHCC1Q9P281 2608 aa21.33■■□□□ 1
C9orf3-209ENST00000460573 TMEM120BA0PK00 339 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 FOXE1O00358 373 aaPredicted RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 TERTO14746 1132 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 NPHS1O60500 1241 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 SASH3O75995 380 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ESRRBO95718 433 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ENO1P06733 434 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 DHRS4L1P0CG22 281 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ITGAXP20702 1163 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 TGM3Q08188 693 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 IFT88Q13099 833 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 DNASE1L3Q13609 305 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 MPP2Q14168 576 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 LY6DQ14210 128 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 TMEM35AQ53FP2 167 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 TOR1AIP1Q5JTV8 583 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 FRG2Q64ET8 278 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 LETMD1Q6P1Q0 360 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 CHSY3Q70JA7 882 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 HUS1BQ8NHY5 278 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 ZCCHC10Q8TBK6 192 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 UTP15Q8TED0 518 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 SNRNP27Q8WVK2 155 aaKnown RBP21.32■■□□□ 1
C9orf3-209ENST00000460573 COL26A1Q96A83 441 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 FRG2BQ96QU4 278 aa21.32■■□□□ 1
C9orf3-209ENST00000460573 MECRQ9BV79 373 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms