RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 ANKRD49Q8WVL7 239 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SNAPC3Q92966 411 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OTUB2Q96DC9 234 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NXPE2Q96DL1 559 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SCRN2Q96FV2 425 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ARL5BQ96KC2 179 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 BIN3Q9NQY0 253 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF358Q9NW07 568 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 HCN3Q9P1Z3 774 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TRPS1Q9UHF7 1281 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FBXO10Q9UK96 956 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ERVW-1Q9UQF0 538 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PCDHGA7Q9Y5G6 932 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SPIN1Q9Y657 262 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 A3GALT2U3KPV4 340 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PDE4DIPQ5VU43 2346 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PROM1O43490 865 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 EEDO75530 441 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CREG1O75629 220 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GADD45GO95257 159 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 IFNGP01579 166 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PKMP14618 531 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 BMP7P18075 431 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NTSP30990 170 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CPOXP36551 454 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GMPRP36959 345 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PNLIPRP1P54315 467 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CDH12P55289 794 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 DEFB103AP81534 67 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 RPL6Q02878 288 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 COL28A1Q2UY09 1125 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FNDC3BQ53EP0 1204 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GPAT3Q53EU6 434 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 IDNKQ5T6J7 187 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NCEH1Q6PIU2 408 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ZC3H14Q6PJT7 736 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CYP20A1Q6UW02 462 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 KDELC1Q6UW63 502 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ADCK2Q7Z695 626 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PDZD9Q8IXQ8 264 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TEX26Q8N6G2 289 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 METTL25Q8N6Q8 603 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OR4K2Q8NGD2 314 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CEP76Q8TAP6 659 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MGME1Q9BQP7 344 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MIR1-1HGQ9H1L0 117 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NIPAL2Q9H841 368 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 AGPAT4Q9NRZ5 378 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NDUFAF4Q9P032 175 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 NDRG2Q9UN36 371 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ZNF451Q9Y4E5 1061 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TIMM22Q9Y584 194 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OAS3Q9Y6K5 1087 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MAU2Q9Y6X3 613 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SPACA6W5XKT8 324 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 FAM86C2PA6NEL3 165 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CLDN24A6NM45 220 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ISM1B1AKI9 464 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TLR4O00206 839 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CFL1P23528 166 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 HTR2AP28223 471 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 RYKP34925 604 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 BMPR1AP36894 532 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CSKP41240 450 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MAP2K4P45985 399 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 CACNG1Q06432 222 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 GALNT1Q10472 559 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 KEAP1Q14145 624 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ATG9BQ674R7 924 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 ANKRD54Q6NXT1 300 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 SLC15A3Q8IY34 581 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 LIX1Q8N485 282 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PAPD5Q8NDF8 572 aaKnown RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 OR5H6Q8NGV6 325 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 STOML3Q8TAV4 291 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 MUL1Q969V5 352 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 RFT1Q96AA3 541 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 VMP1Q96GC9 406 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 POLMQ9NP87 494 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TIGARQ9NQ88 270 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 KCNN3Q9UGI6 736 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 TBC1D24Q9ULP9 559 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 PCDHGB1Q9Y5G3 927 aa5.99□□□□□ -1.45
VPS13D-202ENST00000460333 A0A1W2PRU2 124 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 ADAM12O43184 909 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 SLC28A2O43868 658 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 OR5F1O95221 314 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 POP4O95707 220 aaKnown RBP5.98□□□□□ -1.45
VPS13D-202ENST00000460333 GOT2P00505 430 aaKnown RBP5.98□□□□□ -1.45
VPS13D-202ENST00000460333 TRBC1P01850 177 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 AHSGP02765 367 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 MC4RP32245 332 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 TRIM23P36406 574 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 DDOSTP39656 456 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 CAPZA2P47755 286 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 HNMTP50135 292 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 INHBCP55103 352 aa5.98□□□□□ -1.45
VPS13D-202ENST00000460333 RPS14P62263 151 aaKnown RBP5.98□□□□□ -1.45
VPS13D-202ENST00000460333 PPP2R2BQ00005 443 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms