RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 CARMIL1Q5VZK9 1371 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 DNAJC25-GNG10A0A024R161 153 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IGLV4-60A0A075B6I1 120 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IGLV3-10A0A075B6K4 115 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IGHV1-18A0A0C4DH31 117 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IGHV3-64DA0A0J9YX35 117 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CCDC195A0A1B0GUA6 201 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 A0A1B0GVI7 797 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NKX6-3A6NJ46 265 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 A6NNZ2 444 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 C17orf98A8MV24 154 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 C9JCJ5 164 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 F5H423 210 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 H7C423 109 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 GOLGA8RI6L899 631 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 UPK1AO00322 258 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SLC33A1O00400 549 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 E2F3O00716 465 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 MRPS12O15235 138 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 AP5Z1O43299 807 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 OR7C2O60412 319 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 USP12O75317 370 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TCEA3O75764 348 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TSPAN9O75954 239 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NOL4O94818 638 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ESRRBO95718 433 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 EPPINO95925 133 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IFNA4P05014 189 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IFNA16P05015 189 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SRPRAP08240 638 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 VSIG10L2P0DP72 767 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 UROSP10746 265 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ERGP11308 486 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CYP2C9P11712 490 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 HMGA1P17096 107 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CHRM3P20309 590 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 FPR1P21462 350 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CA4P22748 312 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 PRTN3P24158 256 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 F2RP25116 425 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 BRD2P25440 801 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 IL12BP29460 328 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SERPINB6P35237 376 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 GJC1P36383 396 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TCF7P36402 384 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ARL1P40616 181 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 OR1E2P47887 323 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NR2C2P49116 596 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 GSK3BP49841 420 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 DNA2P51530 1060 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 AKR1D1P51857 326 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 MFAP2P55001 183 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 EIF6P56537 245 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 JAM2P57087 298 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ERVK11-1P61568 191 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 FKBP1BP68106 108 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NOP14P78316 857 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CLDN10P78369 228 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 KLC1Q07866 573 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SLAMF1Q13291 335 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ZNF211Q13398 564 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 C16orf72Q14CZ0 275 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ARHGEF6Q15052 776 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 BRD3Q15059 726 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NRF1Q16656 503 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TXNRD1Q16881 649 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 DPY19L1Q2PZI1 675 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TBRG1Q3YBR2 411 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SFT2D3Q587I9 215 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TMEM69Q5SWH9 247 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 L1TD1Q5T7N2 865 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 NDUFAF5Q5TEU4 345 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 MLIPQ5VWP3 458 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 FAM91A1Q658Y4 838 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SEL1L3Q68CR1 1132 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SCYL2Q6P3W7 929 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SLC27A1Q6PCB7 646 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SYCE2Q6PIF2 218 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SYT10Q6XYQ8 523 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TMEM136Q6ZRR5 245 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 RINLQ6ZS11 566 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 Q6ZS92 163 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 PAQR9Q6ZVX9 377 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 BEND5Q7L4P6 421 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ZNF550Q7Z398 422 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 BNIPLQ7Z465 357 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 TMED4Q7Z7H5 227 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 HMGN2P46Q86SG4 172 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 LDB1Q86U70 411 aaPredicted RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 GPR180Q86V85 440 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ZSCAN30Q86W11 494 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 CCDC105Q8IYK2 499 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 BOD1L2Q8IYS8 172 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 GAPTQ8N292 157 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 SRBD1Q8N5C6 995 aaKnown RBP-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 KLHDC1Q8N7A1 406 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ZNF611Q8N823 705 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 ANKRD53Q8N9V6 530 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 Q8NAQ8 132 aa-2.17□□□□□ -2.76
SNORD54-201ENST00000459159 FANCBQ8NB91 859 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms