RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 GALNTL5Q7Z4T8 443 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 SIAH3Q8IW03 269 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 ZNF740Q8NDX6 193 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 OR56A3Q8NH54 315 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 MTFMTQ96DP5 389 aaKnown RBP20.22■□□□□ 0.83
CPNE1-220ENST00000458038 SNF8Q96H20 258 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 OLFM1Q99784 485 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 CDCP1Q9H5V8 836 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 ANKRD10Q9NXR5 420 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 ARL15Q9NXU5 204 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 NPIPA1Q9UND3 350 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 JRKLQ9Y4A0 524 aa20.22■□□□□ 0.83
CPNE1-220ENST00000458038 NDUFS4O43181 175 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 CDC123O75794 336 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 NEURL1O76050 574 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 WISP2O76076 250 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 ABOP16442 354 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 POU3F2P20265 443 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 AHRP35869 848 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 CYB561P49447 251 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 CRYMQ14894 314 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 KCTD19Q17RG1 926 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 MBOAT1Q6ZNC8 495 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 GALNT7Q86SF2 657 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 SHISA5Q8N114 240 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 AGGF1Q8N302 714 aaeCLIP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 GPATCH11Q8N954 259 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 PHF10Q8WUB8 498 aaKnown RBP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 LINGO1Q96FE5 620 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 NDNQ99608 321 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 HES7Q9BYE0 225 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 TRIM8Q9BZR9 551 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 TRIM45Q9H8W5 580 aaPredicted RBP20.21■□□□□ 0.83
CPNE1-220ENST00000458038 ZFP69BQ9UJL9 534 aa20.21■□□□□ 0.83
CPNE1-220ENST00000458038 ZNF860A6NHJ4 632 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 CHST10O43529 356 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 PRMT3O60678 531 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 SLC25A12O75746 678 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 ENO2P09104 434 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-220ENST00000458038 MAPKAPK3Q16644 382 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 PHKG1Q16816 387 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 DEFB134Q4QY38 66 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 QSOX2Q6ZRP7 698 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-220ENST00000458038 CNTN4Q8IWV2 1026 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 POGLUT1Q8NBL1 392 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 NT5CQ8TCD5 201 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 TSLPQ969D9 159 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 TMEM125Q96AQ2 219 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 FBXL8Q96CD0 374 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 PTCHD1Q96NR3 888 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 TRIM51Q9BSJ1 452 aa20.2■□□□□ 0.82
CPNE1-220ENST00000458038 CORO1CQ9ULV4 474 aaPredicted RBP20.2■□□□□ 0.82
CPNE1-220ENST00000458038 E9PLN8 166 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 PRRG2O14669 202 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 NRDCO43847 1150 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 NME2P1O60361 137 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 MAN1A2O60476 641 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 TSPAN12O95859 305 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 SNRPB2P08579 225 aaKnown RBP20.19■□□□□ 0.82
CPNE1-220ENST00000458038 CAPN3P20807 821 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 NME2P22392 152 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 CDKN2DP55273 166 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 CSHL1Q14406 222 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 SPANXN3Q5MJ09 141 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 SPNS2Q8IVW8 549 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 ARMC10Q8N2F6 343 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 ARMC2Q8NEN0 867 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 TRPV3Q8NET8 790 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 OR5T3Q8NGG3 340 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 SPOCK3Q9BQ16 436 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 VKORC1Q9BQB6 163 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 RBCK1Q9BYM8 510 aa20.19■□□□□ 0.82
CPNE1-220ENST00000458038 TSPAN10Q9H1Z9 355 aaPredicted RBP20.19■□□□□ 0.82
CPNE1-220ENST00000458038 HIVEP1P15822 2718 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 PGRMC1O00264 195 aaKnown RBP20.18■□□□□ 0.82
CPNE1-220ENST00000458038 FCHO1O14526 889 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 B4GALT2O60909 372 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 AHSGP02765 367 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 RNH1P13489 461 aaKnown RBP20.18■□□□□ 0.82
CPNE1-220ENST00000458038 ZNF24P17028 368 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 TRHRP34981 398 aaPredicted RBP20.18■□□□□ 0.82
CPNE1-220ENST00000458038 SCTRP47872 440 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 FNTAP49354 379 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 PDAP1Q13442 181 aaKnown RBP20.18■□□□□ 0.82
CPNE1-220ENST00000458038 LRRC8AQ8IWT6 810 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 PYCR2Q96C36 320 aa20.18■□□□□ 0.82
CPNE1-220ENST00000458038 SAGE2PA6NJ88 616 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 PSMD12O00232 456 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 SERPIND1P05546 499 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 ZNF888P0CJ79 500 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 GABRB3P28472 473 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 TPP2P29144 1249 aaPredicted RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 HLCSP50747 726 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 RIPPLY3P57055 190 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 MLF1P58340 268 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 RBM20Q5T481 1227 aaKnown RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 RNASEH2BQ5TBB1 312 aaKnown RBP20.17■□□□□ 0.82
CPNE1-220ENST00000458038 DOLPP1Q86YN1 238 aa20.17■□□□□ 0.82
CPNE1-220ENST00000458038 ZNF295-AS1Q8N0V1 137 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms