RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 EFHD1Q9BUP0 239 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 NLNQ9BYT8 704 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 KLHL31Q9H511 634 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 GPN2Q9H9Y4 310 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 ZNF304Q9HCX3 659 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SEMA4BQ9NPR2 832 aaPredicted RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 OXSMQ9NWU1 459 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SLC17A7Q9P2U7 560 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 NDOR1Q9UHB4 597 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 KCND3Q9UK17 655 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 RNF11Q9Y3C5 154 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 TSC22D4Q9Y3Q8 395 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 MRPS18BQ9Y676 258 aaKnown RBP9.55□□□□□ -0.88
ATG4A-206ENST00000457035 SLC22A7Q9Y694 548 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 MAU2Q9Y6X3 613 aa9.55□□□□□ -0.88
ATG4A-206ENST00000457035 A0A0A6YYC8 382 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 LRIT2A6NDA9 550 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ANKDD1BA6NHY2 528 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 H0YIV9 168 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 I3L1I5 382 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 K7ENP7 123 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CNOT3O75175 753 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CLEC3AO75596 197 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 KLF7O75840 302 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SUPT7LO94864 414 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 NSA2O95478 260 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CLDN9O95484 217 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 RECKO95980 971 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ALBP02768 609 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SERPIND1P05546 499 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SLC35G6P0C7Q6 338 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PIM1P11309 404 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 TSPAN8P19075 237 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 GSTM2P28161 218 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ETV4P43268 484 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CCNG1P51959 295 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 RPS15P62841 145 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CYP4F2P78329 520 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 MPP2Q14168 576 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 NDUFA9Q16795 377 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ADPRMQ3LIE5 342 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 BROXQ5VW32 411 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 MLIPQ5VWP3 458 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 MED27Q6P2C8 311 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 INO80CQ6PI98 192 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CCDC81Q6ZN84 652 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PRSS41Q7RTY9 318 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 MILR1Q7Z6M3 343 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PDSS2Q86YH6 399 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 TMEM151BQ8IW70 566 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 METTL27Q8N6F8 245 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 AMER3Q8N944 861 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 OR9A4Q8NGU2 314 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 WDR20Q8TBZ3 569 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 UTP15Q8TED0 518 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 TRPC4APQ8TEL6 797 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 UBE2E3Q969T4 207 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ATP6V1E2Q96A05 226 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 KIAA1143Q96AT1 154 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 FAM111AQ96PZ2 611 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 DRC3Q9H069 523 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SLC26A1Q9H2B4 701 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PRORYQ9H606 182 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 TMBIM4Q9HC24 238 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CPNE5Q9HCH3 593 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 SSU72Q9NP77 194 aaKnown RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 IFT80Q9P2H3 777 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-206ENST00000457035 CDC14AQ9UNH5 594 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PCDHGA11Q9Y5H2 935 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ACTL7BQ9Y614 415 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 PIEZO2Q9H5I5 2752 aa9.54□□□□□ -0.88
ATG4A-206ENST00000457035 ATMQ13315 3056 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 IGLV3-12A0A075B6K2 115 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 VSTM2BA6NLU5 285 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 C4orf51C9J302 202 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 H0YIG0 161 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 NKX2-8O15522 239 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 DNAJB6O75190 326 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CREG1O75629 220 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 B3GALT4O96024 378 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CD63P08962 238 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 MYZAPP0CAP1 466 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 ALOX12P18054 663 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 IL1RNP18510 177 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 HNRNPH1P31943 449 aaKnown RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 NAGLUP54802 743 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 UCNP55089 124 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 TMPRSS3P57727 454 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 RPS18P62269 152 aaKnown RBP9.53□□□□□ -0.88
ATG4A-206ENST00000457035 CXADRP78310 365 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 RGS1Q08116 209 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 VAC14Q08AM6 782 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 C19orf57Q0VDD7 668 aa9.53□□□□□ -0.88
ATG4A-206ENST00000457035 SLC9A5Q14940 896 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms