RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 LMNTD1Q8N9Z9 388 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 NUS1Q96E22 293 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 LINC00615Q96LM1 132 aaPredicted RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ZCCHC2Q9C0B9 1178 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 EHD1Q9H4M9 534 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 REEP4Q9H6H4 257 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ARMC7Q9H6L4 198 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 SH3BP4Q9P0V3 963 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF282Q9UDV7 671 aaPredicted RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 MRPS23Q9Y3D9 190 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 PCDHGB1Q9Y5G3 927 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 SNX5Q9Y5X3 404 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 CCDC85CA6NKD9 419 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 E9PQ18 207 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 KLHL18O94889 574 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ADH1CP00326 375 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 HLA-EP13747 358 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 JUNDP17535 347 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 SLC6A11P48066 632 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 TAP2Q03519 686 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ELP6Q0PNE2 266 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 TMEM240Q5SV17 173 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.66■□□□□ 0.428e-6■■■■■ 27.9
SEMA3B-209ENST00000456560 FAHD1Q6P587 224 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 COMMD6Q7Z4G1 85 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 TRAPPC5Q8IUR0 188 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF547Q8IVP9 402 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 OR4A15Q8NGL6 344 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 TRIM39Q9HCM9 518 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 DMRT3Q9NQL9 472 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 NDRG4Q9ULP0 352 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 ERGIC3Q9Y282 383 aa17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 SAMHD1Q9Y3Z3 626 aaKnown RBP17.66■□□□□ 0.42
SEMA3B-209ENST00000456560 C17orf113A0A1B0GUU1 675 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 PIPSLA2A3N6 862 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 PTGES3LE9PB15 166 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 XPNPEP2O43895 674 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 ANGPTL1O95841 491 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 CDH3P22223 829 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 GPR1P46091 355 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 DPTQ07507 201 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 ZNF763Q0D2J5 394 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 HNRNPA1L2Q32P51 320 aaKnown RBP17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 LAIR1Q6GTX8 287 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 TSEN54Q7Z6J9 526 aaKnown RBP17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 B3GNT8Q7Z7M8 397 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 KIAA1958Q8N8K9 716 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 MAL2Q969L2 176 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 ITM2CQ9NQX7 267 aa17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 TRNAU1APQ9NX07 287 aaKnown RBP17.65■□□□□ 0.42
SEMA3B-209ENST00000456560 CYP4B1P13584 511 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 C6P13671 934 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 ACADLP28330 430 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 CXCR4P61073 352 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 PDE7AQ13946 482 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 STARD3Q14849 445 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 GAB4Q2WGN9 574 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 RAET1GQ6H3X3 334 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 NXPE4Q6UWF7 544 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 TTC29Q8NA56 475 aaPredicted RBP17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 WDR48Q8TAF3 677 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 OR8D1Q8WZ84 308 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 ABHD8Q96I13 439 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 TPD52L3Q96J77 140 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 FAM129BQ96TA1 746 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 SPNS1Q9H2V7 528 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 RAD21L1Q9H4I0 556 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 DUSP21Q9H596 190 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 REEP1Q9H902 201 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 GPATCH2Q9NW75 528 aa17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 THUMPD1Q9NXG2 353 aaKnown RBP17.64■□□□□ 0.42
SEMA3B-209ENST00000456560 KIAA1549LQ6ZVL6 1849 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 EDDM13A0A1B0GTR0 161 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 PLK4O00444 970 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 SUV39H1O43463 412 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 MMP20O60882 483 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 POP7O75817 140 aaKnown RBP17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 NTRK1P04629 796 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 VIPR2P41587 438 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 GP2P55259 537 aaKnown RBP17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 UBE3AQ05086 875 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF852Q6ZMS4 543 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 SLC16A12Q6ZSM3 486 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 NCCRP1Q6ZVX7 275 aaPredicted RBP17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 C11orf65Q8NCR3 313 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 SLC5A11Q8WWX8 675 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 ZNF514Q96K75 400 aaPredicted RBP17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 EPYCQ99645 322 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 NEURL2Q9BR09 285 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 DOHHQ9BU89 302 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 FUNDC2Q9BWH2 189 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 ADPRHL2Q9NX46 363 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 B3GNT3Q9Y2A9 372 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 PADI2Q9Y2J8 665 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 GMPPBQ9Y5P6 360 aa17.64■□□□□ 0.41
SEMA3B-209ENST00000456560 TCF20Q9UGU0 1960 aaKnown RBP17.63■□□□□ 0.41
SEMA3B-209ENST00000456560 MUC22E2RYF6 1773 aaPredicted RBP17.63■□□□□ 0.41
SEMA3B-209ENST00000456560 CHD7Q9P2D1 2997 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms