RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CASP2P42575 452 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 AGTR2P50052 363 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 ALDH18A1P54886 795 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 SOX8P57073 446 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 SKP1P63208 163 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 MAT1AQ00266 395 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 NAA30Q147X3 362 aaPredicted RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 SETDB1Q15047 1291 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 RBBP5Q15291 538 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 RBBP7Q16576 425 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 SYT16Q17RD7 645 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 TSNAXIP1Q2TAA8 658 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 LGSNQ5TDP6 509 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 PRAMEF9Q5VWM5 478 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 METTL2BQ6P1Q9 378 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 TIFABQ6ZNK6 161 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 ABHD13Q7L211 337 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 PLD6Q8N2A8 252 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 SMAD5Q99717 465 aaKnown RBP16.41■□□□□ 0.22
USP39-208ENST00000455732 EFCAB11Q9BUY7 163 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 ANKZF1Q9H8Y5 726 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 GPR83Q9NYM4 423 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 FBXL4Q9UKA2 621 aa16.41■□□□□ 0.22
USP39-208ENST00000455732 A6NL46 340 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 SGK494L7N484 410 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 MASP2O00187 686 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 FFAR3O14843 346 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 GPR42O15529 346 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 GALR3O60755 368 aaPredicted RBP16.4■□□□□ 0.22
USP39-208ENST00000455732 BMP10O95393 424 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 RBP1P09455 135 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 IL10P22301 178 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 HYAL2Q12891 473 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 LAPTM5Q13571 262 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 SLC29A2Q14542 456 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 TUBB8Q3ZCM7 444 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 PAGE2BQ5JRK9 111 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 LAPTM4BQ86VI4 370 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 PRSS58Q8IYP2 241 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 OR11G2Q8NGC1 345 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 OR51Q1Q8NH59 317 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 YIPF2Q9BWQ6 316 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 CLK4Q9HAZ1 481 aaKnown RBP16.4■□□□□ 0.22
USP39-208ENST00000455732 OPTCQ9UBM4 332 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 TMCO1Q9UM00 188 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 G3BP2Q9UN86 482 aaKnown RBP16.4■□□□□ 0.22
USP39-208ENST00000455732 NAALAD2Q9Y3Q0 740 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 ZNF451Q9Y4E5 1061 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 SCN2AQ99250 2005 aa16.4■□□□□ 0.22
USP39-208ENST00000455732 KLHL41O60662 606 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 RDH16O75452 317 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 CLEC3AO75596 197 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 WFS1O76024 890 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 SERPIND1P05546 499 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 ZNF888P0CJ79 500 aaPredicted RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 SMIM10L1P0DMW3 83 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 GFAPP14136 432 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 ACPPP15309 386 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 CD22P20273 847 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 EMP2P54851 167 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 STXBP1P61764 594 aaKnown RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 IRF8Q02556 426 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 AIMP2Q13155 320 aaKnown RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 DOC2AQ14183 400 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 MYBPC3Q14896 1274 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 PCBP2Q15366 365 aaKnown RBP eCLIP16.39■□□□□ 0.21
USP39-208ENST00000455732 PFKFB4Q16877 469 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 XKR6Q5GH73 641 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 HPS6Q86YV9 775 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 GALNT16Q8N428 558 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 UTP15Q8TED0 518 aaKnown RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 SMIM10Q96HG1 83 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 OR1F2PQ96R84 312 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 RHBGQ9H310 441 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 ATP13A2Q9NQ11 1180 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 HCN3Q9P1Z3 774 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 PSMC3IPQ9P2W1 217 aaPredicted RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 XPR1Q9UBH6 696 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 TNPO3Q9Y5L0 923 aaKnown RBP16.39■□□□□ 0.21
USP39-208ENST00000455732 RELNP78509 3460 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 PTPN13Q12923 2485 aa16.39■□□□□ 0.21
USP39-208ENST00000455732 COL12A1Q99715 3063 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 LOC102723996A0A087X1L8 192 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 IQANK1A0A1B0GTG1 560 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 HEXBP07686 556 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 EPB42P16452 691 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 HPDP32754 393 aaPredicted RBP16.38■□□□□ 0.21
USP39-208ENST00000455732 XCR1P46094 333 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 FOXK1P85037 733 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 CHIT1Q13231 466 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 RAPSNQ13702 412 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 ADPRMQ3LIE5 342 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 NADK2Q4G0N4 442 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 DEFB134Q4QY38 66 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 TMEM205Q6UW68 189 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 LCA5Q86VQ0 697 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 UBE2E3Q969T4 207 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 GAL3ST3Q96A11 431 aa16.38■□□□□ 0.21
USP39-208ENST00000455732 CCDC77Q9BR77 488 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms