RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SLC6A17Q9H1V8 727 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMEM245Q9H330 911 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRABDQ9H4I3 376 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZDHHC6Q9H6R6 413 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 C8orf33Q9H7E9 229 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 C20orf96Q9NUD7 363 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 HACD3Q9P035 362 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 PSMC3IPQ9P2W1 217 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 THAP10Q9P2Z0 257 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 DKK3Q9UBP4 350 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 CTNNAL1Q9UBT7 734 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 SUN2Q9UH99 717 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANAPC2Q9UJX6 822 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 ARL5AQ9Y689 179 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 AP1M2Q9Y6Q5 423 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 COL6A3P12111 3177 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANKRD12Q6UB98 2062 aa5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 MUC22E2RYF6 1773 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P4-201ENST00000455362 COL4A2P08572 1712 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 A0A0U1RQS6 177 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 A0A1W2PPM1 405 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 A0A1W2PQ67 120 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TSPAN11A1L157 253 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCDC162PA2VCL2 907 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR2A25A4D2G3 310 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 LOC730098B7Z3J9 87 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 GOLGA8TH3BQL2 631 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCL22O00626 93 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 LDLRAD4O15165 306 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 POLR3GO15318 223 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 STX7O15400 261 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 BUD23O43709 281 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CBFA2T3O75081 653 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 RECQL5O94762 991 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CTSLP07711 333 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 INHBAP08476 426 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SNRPAP09012 282 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ALPIP09923 528 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 HLA-EP13747 358 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CREB1P16220 341 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ITGALP20701 1170 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC6A2P23975 617 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SERPINB9P50453 376 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 BMXP51813 675 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CSE1LP55060 971 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ITGA1P56199 1179 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MAGOHP61326 146 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ARHGAP8P85298 464 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 PDE1BQ01064 536 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TFF2Q03403 129 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ABHD18Q0P651 414 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CSTF3Q12996 717 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MRPL49Q13405 166 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ENPP2Q13822 863 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ACOX1Q15067 660 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMED2Q15363 201 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TYSND1Q2T9J0 566 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TOR1AIP1Q5JTV8 583 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 GRTP1Q5TC63 336 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 LGSNQ5TDP6 509 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ARHGAP40Q5TG30 622 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 BRAT1Q6PJG6 821 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SERPINA13PQ6UXR4 307 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 PACS1Q6VY07 963 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MSANTD1Q6ZTZ1 278 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TPRG1Q6ZUI0 275 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SH2D5Q6ZV89 423 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ERN2Q76MJ5 926 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ADCK2Q7Z695 626 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 KCNMB4Q86W47 210 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CNTN4Q8IWV2 1026 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 TBC1D21Q8IYX1 336 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM185AQ8N0U4 392 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 STK40Q8N2I9 435 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZNF540Q8NDQ6 660 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR4K2Q8NGD2 314 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR13C4Q8NGS5 318 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZFP28Q8NHY6 868 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MZB1Q8WU39 189 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZFAND2BQ8WV99 257 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CDKL2Q92772 493 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 DNASE1L2Q92874 299 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MR1Q95460 341 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CDKN2AIPNLQ96HQ2 116 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 DNAJC1Q96KC8 554 aaKnown RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MCCC1Q96RQ3 725 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 LYSMD1Q96S90 227 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 CPNE1Q99829 537 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 C19orf43Q9BQ61 176 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 RNF32Q9H0A6 362 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC6A15Q9H2J7 730 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MFSD1Q9H3U5 465 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 OSGEPL1Q9H4B0 414 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SUDS3Q9H7L9 328 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 SCPEP1Q9HB40 452 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZDHHC4Q9NPG8 344 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 NRIP3Q9NQ35 241 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 PRSS16Q9NQE7 514 aa5.03□□□□□ -1.6
HMGB1P4-201ENST00000455362 MBNL1Q9NR56 388 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms