RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 SMIM24O75264 130 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 H2AFYO75367 372 aaKnown RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 RDH16O75452 317 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 BMP10O95393 424 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 IGHEP01854 428 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 ZNF888P0CJ79 500 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 HNRNPH1P31943 449 aaKnown RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 OTX2P32243 289 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 RBBP5Q15291 538 aaKnown RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 MED25Q71SY5 747 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 ABHD13Q7L211 337 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 GOLGA7Q7Z5G4 137 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 CYP4X1Q8N118 509 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 TEX9Q8N6V9 391 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 TMEM102Q8N9M5 508 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 MS4A6EQ96DS6 147 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 SCYL1Q96KG9 808 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 CRB3Q9BUF7 120 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 MS4A8Q9BY19 250 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 PARD6BQ9BYG5 372 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 KLHL31Q9H511 634 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 CLK4Q9HAZ1 481 aaKnown RBP13.41□□□□□ -0.26
HDAC4-205ENST00000454542 ZBTB26Q9HCK0 441 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 P4HTMQ9NXG6 502 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 LGALS13Q9UHV8 139 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 EMCNQ9ULC0 261 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 NAALAD2Q9Y3Q0 740 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 BOD1L1Q8NFC6 3051 aa13.41□□□□□ -0.26
HDAC4-205ENST00000454542 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 COL6A6A6NMZ7 2263 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 LOC102723996A0A087X1L8 192 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 LRIT2A6NDA9 550 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 URADA6NGE7 173 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 ARGFXA6NJG6 315 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 IDSB3KWA1 339 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 AGPSO00116 658 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 FFAR3O14843 346 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 GPR42O15529 346 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 GLRA3O75311 464 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 DNAJB5O75953 348 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 PYGBP11216 843 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 SFTPCP11686 197 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 EEF1DP29692 281 aaKnown RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 SERPINB1P30740 379 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 HNF4AP41235 474 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 STXBP1P61764 594 aaKnown RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 SKP1P63208 163 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 TRAF3Q13114 568 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 LIPJQ5W064 366 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 KIRREL2Q6UWL6 708 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 L3MBTL4Q8NA19 623 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 OR2W6PQ8NHA6 318 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 ZNF483Q8TF39 744 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 ZNF473Q8WTR7 871 aaKnown RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 UBE2E3Q969T4 207 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 QRFPRQ96P65 431 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 OR1F2PQ96R84 312 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 ARHGAP9Q9BRR9 750 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 ING2Q9H160 280 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 MLXIPLQ9NP71 852 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 HCN3Q9P1Z3 774 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 C3orf18Q9UK00 162 aa13.4□□□□□ -0.26
HDAC4-205ENST00000454542 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
HDAC4-205ENST00000454542 CFAP46Q8IYW2 2715 aa13.4□□□□□ -0.27
HDAC4-205ENST00000454542 ZNF860A6NHJ4 632 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 H0YIV9 168 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR7A17O14581 309 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SCELO95171 688 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 B3GALT4O96024 378 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SERPIND1P05546 499 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 TUBBP07437 444 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 IL10P22301 178 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 DEKP35659 375 aaKnown RBP13.39□□□□□ -0.27
HDAC4-205ENST00000454542 XCR1P46094 333 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 RRADP55042 308 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SOX8P57073 446 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 CHAF1BQ13112 559 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 GGTA1PQ4G0N0 100 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 DEFB134Q4QY38 66 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 TOR1AIP1Q5JTV8 583 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 MED27Q6P2C8 311 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 TMEM205Q6UW68 189 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 LAPTM4BQ86VI4 370 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR2L5Q8NG80 312 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR7G3Q8NG95 312 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR52B6Q8NGF0 335 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR5T3Q8NGG3 340 aa13.39□□□□□ -0.27
HDAC4-205ENST00000454542 OR51Q1Q8NH59 317 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms