RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 TRBC2A0A5B9 178 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 EIF4E1BA6NMX2 242 aaKnown RBP13.92□□□□□ -0.18
VPS16-205ENST00000453689 FOXS1O43638 330 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 TRIM13O60858 407 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 C1QL1O75973 258 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 SUPT7LO94864 414 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 ALBP02768 609 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 NAGLUP54802 743 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 REEP5Q00765 189 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 PCDH1Q08174 1060 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 SSPNQ14714 243 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 NKG7Q16617 165 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 UNC50Q53HI1 259 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 HHATQ5VTY9 493 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 ATG9BQ674R7 924 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 MFSD9Q8NBP5 474 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 CAMKVQ8NCB2 501 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 PPP4R1Q8TF05 950 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 COL26A1Q96A83 441 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 MVB12AQ96EY5 273 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 NSUN5Q96P11 429 aaKnown RBP13.92□□□□□ -0.18
VPS16-205ENST00000453689 MACROD1Q9BQ69 325 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 SLC26A1Q9H2B4 701 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 ADNPQ9H2P0 1102 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 EHD1Q9H4M9 534 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 WDR54Q9H977 334 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
VPS16-205ENST00000453689 MRPS2Q9Y399 296 aaKnown RBP13.92□□□□□ -0.18
VPS16-205ENST00000453689 A0A0A6YYC8 382 aaPredicted RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 I3L1I5 382 aaPredicted RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 BIRC5O15392 142 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 OR1F1O43749 312 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 UMODP07911 640 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 C1GALT1C1LP0DN25 315 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 FBLP22087 321 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 OTX2P32243 289 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 WDR4P57081 412 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 PPP2R2AP63151 447 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 IRF8Q02556 426 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 KCNAB2Q13303 367 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 FAM53BQ14153 422 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 NDUFA9Q16795 377 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 CFAP157Q5JU67 520 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 CPZQ66K79 652 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 SLCO4C1Q6ZQN7 724 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 RPS27LQ71UM5 84 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 ASPGQ86U10 573 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 RAB43Q86YS6 212 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 NUDCD3Q8IVD9 361 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 APLFQ8IW19 511 aaPredicted RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 KCT2Q8NC54 265 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 MGARPQ8TDB4 240 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 WDR34Q96EX3 536 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 PTCD3Q96EY7 689 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 MMABQ96EY8 250 aaPredicted RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 SPSB2Q99619 263 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 AIF1LQ9BQI0 150 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 EFCAB11Q9BUY7 163 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 GATA5Q9BWX5 397 aaPredicted RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 DRC3Q9H069 523 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 GSTO2Q9H4Y5 243 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 ZBTB26Q9HCK0 441 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 GEMIN8Q9NWZ8 242 aaKnown RBP13.91□□□□□ -0.18
VPS16-205ENST00000453689 STK38LQ9Y2H1 464 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 ATRXP46100 2492 aa13.91□□□□□ -0.18
VPS16-205ENST00000453689 ARGFXA6NJG6 315 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 VSTM2BA6NLU5 285 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 OR7A17O14581 309 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 UGDHO60701 494 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 H2AFYO75367 372 aaKnown RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 MLYCDO95822 493 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SLC35G6P0C7Q6 338 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SFTPCP11686 197 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 NR1D1P20393 614 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CXCR2P25025 360 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 VARSP26640 1264 aaKnown RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 CASP2P42575 452 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SCTRP47872 440 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CCNG1P51959 295 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CDH13P55290 713 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CLCQ05315 142 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 LCP2Q13094 533 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CHAF1BQ13112 559 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 CHIT1Q13231 466 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 ATP1A4Q13733 1029 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 DSG2Q14126 1118 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 DOC2AQ14183 400 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 E2F2Q14209 437 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.18
VPS16-205ENST00000453689 TBCCQ15814 346 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 RBBP7Q16576 425 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 XKR6Q5GH73 641 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 PAGE2BQ5JRK9 111 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 TMEM214Q6NUQ4 689 aaKnown RBP13.9□□□□□ -0.18
VPS16-205ENST00000453689 SHISA6Q6ZSJ9 500 aa13.9□□□□□ -0.18
VPS16-205ENST00000453689 FRMD7Q6ZUT3 714 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms