RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 KLHDC8AQ8IYD2 350 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 LGI4Q8N135 537 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 SLC5A8Q8N695 610 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 PEX11GQ96HA9 241 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 FAR2Q96K12 515 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 RBBP8Q99708 897 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 MCMBPQ9BTE3 642 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 EHD1Q9H4M9 534 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 KCNK13Q9HB14 408 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 MMP25Q9NPA2 562 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 PCDHGB6Q9Y5F9 930 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 HIVEP3Q5T1R4 2406 aa16.1■□□□□ 0.17
TNFRSF4-202ENST00000453580 A0A1B0GUH1 482 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 A8MUI8 341 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CLGNO14967 610 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 RAD51CO43502 376 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CHST10O43529 356 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 WDR47O94967 919 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 RASAL1O95294 804 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 WDPCPO95876 746 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 ZNF888P0CJ79 500 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 C1GALT1C1LP0DN25 315 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 RNH1P13489 461 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SSTR1P30872 391 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 STX2P32856 288 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 OR4D2P58180 307 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 NAB1Q13506 487 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 RCN2Q14257 317 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 TGFBIQ15582 683 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 TSNQ15631 228 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SULT1C3Q6IMI6 304 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 H3F3CQ6NXT2 135 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 PAPD4Q6PIY7 484 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 TMIGD1Q6UXZ0 262 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 QSOX2Q6ZRP7 698 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CAPN12Q6ZSI9 719 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CEP128Q6ZU80 1094 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CCDC91Q7Z6B0 441 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 GPSM1Q86YR5 675 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SPNS2Q8IVW8 549 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CEP97Q8IW35 865 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 CATSPER1Q8NEC5 780 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 ADAMTS18Q8TE60 1221 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 RHBDF1Q96CC6 855 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 GPR22Q99680 433 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SLX1AQ9BQ83 275 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 MESP1Q9BRJ9 268 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 SLC6A16Q9GZN6 736 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 WWOXQ9NZC7 414 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 NTNG1Q9Y2I2 539 aa16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 USP9YO00507 2555 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 USP9XQ93008 2570 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF4-202ENST00000453580 TCRBV9S1A1TA0A576 114 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 WIPF3A6NGB9 483 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 FAM159BA6NKW6 160 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 PRMT3O60678 531 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 PRAMEF2O60811 474 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 CCDC166P0CW27 439 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 GGT5P36269 586 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 RHAGQ02094 409 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 TGM3Q08188 693 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 LAPTM5Q13571 262 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 HIST2H2ACQ16777 129 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 C4orf17Q53FE4 359 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 ACER2Q5QJU3 275 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 HIST2H2AA3Q6FI13 130 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 LANCL3Q6ZV70 420 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 CTAGE3PQ8IX95 158 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 C7orf57Q8NEG2 295 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 NPLQ9BXD5 320 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 LANCL2Q9NS86 450 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 PLA2G3Q9NZ20 509 aa16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 MRPS33Q9Y291 106 aaKnown RBP16.08■□□□□ 0.16
TNFRSF4-202ENST00000453580 SPTAN1Q13813 2472 aaKnown RBP16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 CCDC189A1A4V9 331 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF860A6NHJ4 632 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ANKDD1BA6NHY2 528 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 CLDN4O14493 209 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 STK16O75716 305 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 LDLRP01130 860 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 SLC6A12P48065 614 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 PGGT1BP53609 377 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 PLTPP55058 493 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 RAB10P61026 200 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ZNF460Q14592 562 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 PAGE2BQ5JRK9 111 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 FAM98AQ8NCA5 519 aaKnown RBP16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 STAG3L4Q8TBR4 150 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 ANKRD49Q8WVL7 239 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 NR4A3Q92570 626 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 MOCOSQ96EN8 888 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 PTCHD1Q96NR3 888 aa16.07■□□□□ 0.16
TNFRSF4-202ENST00000453580 UTP23Q9BRU9 249 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms