RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IFFO1Q0D2I5 559 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 HYAL2Q12891 473 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 GTF2H2Q13888 395 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 HERC3Q15034 1050 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 HIST2H2ACQ16777 129 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-202ENST00000452372 HIST2H2AA3Q6FI13 130 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 GTF2H2CQ6P1K8 395 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 PRSS41Q7RTY9 318 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 RIBC1Q8N443 379 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-202ENST00000452372 AFAP1L2Q8N4X5 818 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 ZCCHC10Q8TBK6 192 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 STT3BQ8TCJ2 826 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 APOBEC4Q8WW27 367 aaKnown RBP18.91■□□□□ 0.62
COL9A3-202ENST00000452372 SLC6A16Q9GZN6 736 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 RHBGQ9H310 441 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 MAP4K5Q9Y4K4 846 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 DOPEY2Q9Y3R5 2298 aa18.91■□□□□ 0.62
COL9A3-202ENST00000452372 SPENQ96T58 3664 aaKnown RBP18.9■□□□□ 0.62
COL9A3-202ENST00000452372 URADA6NGE7 173 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 E2F3O00716 465 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 UMODP07911 640 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 ZGLP1P0C6A0 271 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 ALOX12P18054 663 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 IL1RNP18510 177 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 TAC1P20366 129 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 EEF1DP29692 281 aaKnown RBP18.9■□□□□ 0.62
COL9A3-202ENST00000452372 FOXL2P58012 376 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 TLE1Q04724 770 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 RAB43Q86YS6 212 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 TMEM151BQ8IW70 566 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.9■□□□□ 0.623e-6■■□□□ 12.2
COL9A3-202ENST00000452372 UBE2E3Q969T4 207 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 MIEF2Q96C03 454 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 ABHD17AQ96GS6 310 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 IP6K3Q96PC2 410 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 TGIF2Q9GZN2 237 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 MKKSQ9NPJ1 570 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-202ENST00000452372 ZNF71Q9NQZ8 489 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-202ENST00000452372 TRPC4Q9UBN4 977 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 KCNMB2Q9Y691 235 aa18.9■□□□□ 0.62
COL9A3-202ENST00000452372 LRRK2Q5S007 2527 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 ANKDD1BA6NHY2 528 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 A8MT66 165 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 GLRA3O75311 464 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 CLEC3AO75596 197 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 SMIM10L1P0DMW3 83 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 CCT5P48643 541 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 VWA2Q5GFL6 755 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 LIPJQ5W064 366 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 GRHL2Q6ISB3 625 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 NIPAL1Q6NVV3 410 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 ABHD13Q7L211 337 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 GOLGA7Q7Z5G4 137 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 VN1R5Q7Z5H4 357 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 PDSS2Q86YH6 399 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 UTP15Q8TED0 518 aaKnown RBP18.89■□□□□ 0.61
COL9A3-202ENST00000452372 NACC2Q96BF6 587 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 SMIM10Q96HG1 83 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 TMEM109Q9BVC6 243 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 YIPF2Q9BWQ6 316 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 C1QTNF3Q9BXJ4 246 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 KLHL31Q9H511 634 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 SOX17Q9H6I2 414 aaPredicted RBP18.89■□□□□ 0.61
COL9A3-202ENST00000452372 IPPKQ9H8X2 491 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 LGALS13Q9UHV8 139 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 MAN2B2Q9Y2E5 1009 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 NAALAD2Q9Y3Q0 740 aa18.89■□□□□ 0.61
COL9A3-202ENST00000452372 K7EM74 188 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 SGK494L7N484 410 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 UGDHO60701 494 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 GALR3O60755 368 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-202ENST00000452372 KLHL18O94889 574 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 OTX2P32243 289 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 CRHR1P34998 444 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 HNF4AP41235 474 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 SKP1P63208 163 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 MAT1AQ00266 395 aaKnown RBP18.88■□□□□ 0.61
COL9A3-202ENST00000452372 KLC1Q07866 573 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 SYT16Q17RD7 645 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 MED27Q6P2C8 311 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 SHISA6Q6ZSJ9 500 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 LAS2Q8IYD9 372 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 C9orf43Q8TAL5 461 aaPredicted RBP18.88■□□□□ 0.61
COL9A3-202ENST00000452372 AICDAQ9GZX7 198 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 EPN3Q9H201 632 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 ACTR8Q9H981 624 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 PCTPQ9UKL6 214 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 GRID1Q9ULK0 1009 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 PLAAQ9Y263 795 aa18.88■□□□□ 0.61
COL9A3-202ENST00000452372 LRIT2A6NDA9 550 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 FFAR3O14843 346 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 GPR42O15529 346 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 DLX3O60479 287 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 TBX6O95947 436 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 IGHEP01854 428 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 ZNF888P0CJ79 500 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 KRT4P19013 534 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 MMP11P24347 488 aa18.87■□□□□ 0.61
COL9A3-202ENST00000452372 ATP5F1P24539 256 aaPredicted RBP18.87■□□□□ 0.61
COL9A3-202ENST00000452372 HPDP32754 393 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms