RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TSLPQ969D9 159 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 RHBDF1Q96CC6 855 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 TAAR6Q96RI8 345 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 GPR22Q99680 433 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 EGFL8Q99944 293 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 AIF1LQ9BQI0 150 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 AICDAQ9GZX7 198 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 CAB39LQ9H9S4 337 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 CTNNAL1Q9UBT7 734 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 PLEKHB1Q9UF11 243 aaPredicted RBP11.75□□□□□ -0.53
CPSF4-208ENST00000452047 DYRK1BQ9Y463 629 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 KCNE2Q9Y6J6 123 aa11.75□□□□□ -0.53
CPSF4-208ENST00000452047 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
CPSF4-208ENST00000452047 MAGEB17A8MXT2 336 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 C4orf51C9J302 202 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 CHST10O43529 356 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 WDR47O94967 919 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SERPIND1P05546 499 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 FHP07954 510 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SMIM10L1P0DMW3 83 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 EDN3P14138 238 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 GDF5P43026 501 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 GPX6P59796 221 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ETF1P62495 437 aaKnown RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SKP1P63208 163 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 OLR1P78380 273 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ELOAQ14241 798 aaKnown RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 NSDHLQ15738 373 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ZKSCAN8Q15776 578 aaPredicted RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 INAQ16352 499 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 C18orf21Q32NC0 220 aaPredicted RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 HIST2H2BCQ6DN03 193 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 NIPAL1Q6NVV3 410 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SLCO4C1Q6ZQN7 724 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 FRA10AC1Q70Z53 315 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ABHD13Q7L211 337 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ZNF572Q7Z3I7 529 aaPredicted RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 BCORP1Q8N888 145 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 TRPV3Q8NET8 790 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 CREB3L4Q8TEY5 395 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 CDKL2Q92772 493 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 TBC1D20Q96BZ9 403 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SMIM10Q96HG1 83 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 RBBP8Q99708 897 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 CPNE1Q99829 537 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 TMEM79Q9BSE2 394 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 UNKQ9C0B0 810 aaKnown RBP11.74□□□□□ -0.53
CPSF4-208ENST00000452047 COPG2Q9UBF2 871 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 SLC5A6Q9Y289 635 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 ITPR2Q14571 2701 aa11.74□□□□□ -0.53
CPSF4-208ENST00000452047 OR5H15A6NDH6 313 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 PHGDHO43175 533 aaKnown RBP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 UQCRHP07919 91 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SERPINA6P08185 405 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 GSTA2P09210 222 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 CCDC166P0CW27 439 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 GNAZP19086 355 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 CASQ1P31415 396 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 GGT5P36269 586 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 GP5P40197 560 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SLC12A2P55011 1212 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 RAB8AP61006 207 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 ZNF33BQ06732 778 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 USP10Q14694 798 aaKnown RBP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 TRADDQ15628 312 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 EXT1Q16394 746 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SFT2D3Q587I9 215 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 ZDHHC24Q6UX98 284 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SYT10Q6XYQ8 523 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 C3orf62Q6ZUJ4 267 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 SPATA6LQ8N4H0 392 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 M1APQ8TC57 530 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 FBXO25Q8TCJ0 367 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 TSPAN17Q96FV3 270 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 UBXN10Q96LJ8 280 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 NPAS2Q99743 824 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 KLHL31Q9H511 634 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 CLK4Q9HAZ1 481 aaKnown RBP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 MMP25Q9NPA2 562 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 OLAHQ9NV23 265 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
CPSF4-208ENST00000452047 UTP11Q9Y3A2 253 aaKnown RBP11.73□□□□□ -0.53
CPSF4-208ENST00000452047 DIDO1Q9BTC0 2240 aaKnown RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 CROCCQ5TZA2 2017 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 A1L4Q6 167 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 URADA6NGE7 173 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 NCF1BA6NI72 391 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 A8MUI8 341 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 NCF1CA8MVU1 366 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 TAPBPO15533 448 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 PRAMEF4O60810 478 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 TBX6O95947 436 aaPredicted RBP11.72□□□□□ -0.53
CPSF4-208ENST00000452047 C1GALT1C1LP0DN25 315 aa11.72□□□□□ -0.53
CPSF4-208ENST00000452047 NCF1P14598 390 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms