RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 PCDH17O14917 1159 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 SLC16A5O15375 505 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 SPAG7O75391 227 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 WFS1O76024 890 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 GNGT1P63211 74 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 GUCY1A3Q02108 690 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 RELAQ04206 551 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 NAE1Q13564 534 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 FAM53BQ14153 422 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 MPP2Q14168 576 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 ZNF169Q14929 603 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-208ENST00000451893 MINDY4Q4G0A6 757 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 RBM20Q5T481 1227 aaKnown RBP20.52■□□□□ 0.88
C9orf3-208ENST00000451893 CAPN13Q6MZZ7 669 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-208ENST00000451893 CUZD1Q86UP6 607 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 SPNS2Q8IVW8 549 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 CAMKVQ8NCB2 501 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 ARL15Q9NXU5 204 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 PTGFRNQ9P2B2 879 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 ADAMTS6Q9UKP5 1117 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 PDE10AQ9Y233 779 aa20.52■□□□□ 0.88
C9orf3-208ENST00000451893 IGLV3-12A0A075B6K2 115 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 ANKUB1A6NFN9 424 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 P2RX6O15547 441 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 GLRA3O75311 464 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SAT1P21673 171 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 FDXRP22570 491 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SLC26A3P40879 764 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SLC12A2P55011 1212 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 MAT1AQ00266 395 aaKnown RBP20.51■□□□□ 0.87
C9orf3-208ENST00000451893 USP10Q14694 798 aaKnown RBP20.51■□□□□ 0.87
C9orf3-208ENST00000451893 TLR1Q15399 786 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SYT16Q17RD7 645 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 FAM45BPQ6NSW5 357 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 MBOAT1Q6ZNC8 495 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 LAPTM4BQ86VI4 370 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 ANKRD42Q8N9B4 389 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 ZCCHC10Q8TBK6 192 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 FAM45AQ8TCE6 357 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 DYDC1Q8WWB3 177 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 THAP11Q96EK4 314 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 MAGEB10Q96LZ2 347 aaPredicted RBP20.51■□□□□ 0.87
C9orf3-208ENST00000451893 HAUS8Q9BT25 410 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 ANKHQ9HCJ1 492 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SNX15Q9NRS6 342 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 PLLPQ9Y342 182 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 PCDHGA10Q9Y5H3 936 aa20.51■□□□□ 0.87
C9orf3-208ENST00000451893 SCN3AQ9NY46 2000 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 FAM95CA0A1B0GW59 222 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 GOLGA8RI6L899 631 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 SLC35G6P0C7Q6 338 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 STMN1P16949 149 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 CDKN2DP55273 166 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 MFAP5Q13361 173 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 TERF2Q15554 542 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 CRB2Q5IJ48 1285 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 HECTD2Q5U5R9 776 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 HHATQ5VTY9 493 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 LRRC56Q8IYG6 542 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-208ENST00000451893 OR9A4Q8NGU2 314 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 TCP10LQ8TDR4 215 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 ATL1Q8WXF7 558 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 VPS11Q9H270 941 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 C19orf25Q9UFG5 118 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-208ENST00000451893 VWA7Q9Y334 891 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 CSAG2Q9Y5P2 127 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 CNTRLQ7Z7A1 2325 aa20.5■□□□□ 0.87
C9orf3-208ENST00000451893 FLNCQ14315 2725 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 FEZF1A0PJY2 475 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 H0YIG0 161 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 FOXS1O43638 330 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 GUCA1CO95843 209 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 C8orf89P0DMQ9 161 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 COX6A1P12074 109 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 CDH1P12830 882 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 ICAM2P13598 275 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 IL1RNP18510 177 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 LSP1P33241 339 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 RAB10P61026 200 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 ZKSCAN8Q15776 578 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-208ENST00000451893 ATG9BQ674R7 924 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 FAM180AQ6UWF9 173 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 LCTLQ6UWM7 567 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 ASPGQ86U10 573 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 SIRT6Q8N6T7 355 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 AMER3Q8N944 861 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 BRIX1Q8TDN6 353 aaKnown RBP20.49■□□□□ 0.87
C9orf3-208ENST00000451893 CKAP2Q8WWK9 683 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 TSNARE1Q96NA8 513 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 LMF1Q96S06 567 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.49■□□□□ 0.874e-7■■■■□ 24.4
C9orf3-208ENST00000451893 POPDC3Q9HBV1 291 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 LRRK2Q5S007 2527 aa20.49■□□□□ 0.87
C9orf3-208ENST00000451893 A0A087X1B8 175 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 A0A096LPK6 155 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 IGHV1-45A0A0A0MS14 117 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 SEMA7AO75326 666 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 NSA2O95478 260 aaKnown RBP20.48■□□□□ 0.87
C9orf3-208ENST00000451893 SERPIND1P05546 499 aa20.48■□□□□ 0.87
C9orf3-208ENST00000451893 C2P06681 752 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms