RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MCUBQ9NWR8 336 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRELID3BQ9Y3B1 194 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 PCDHB7Q9Y5E2 793 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 V9GYH0 126 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 PKMP14618 531 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 DIO3P55073 304 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SIRPB2Q5JXA9 342 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 CAPN13Q6MZZ7 669 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 RETSATQ6NUM9 610 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 FUT10Q6P4F1 479 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 OR52E4Q8NGH9 312 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 FAM129BQ96TA1 746 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 GHITMQ9H3K2 345 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 HEBP1Q9NRV9 189 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SAMD4AQ9UPU9 718 aaKnown RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 ERVW-1Q9UQF0 538 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 WASHC1A8K0Z3 465 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SIX3O95343 332 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 TBX18O95935 607 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 MMP2P08253 660 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 RAB3AP20336 220 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 EFNA1P20827 205 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 CD72P21854 359 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 CHMP24386 653 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 ACVR1Q04771 509 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 TP53BP2Q13625 1128 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 ALFQ53S48 1182 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 IL27RAQ6UWB1 636 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF704Q6ZNC4 412 aaPredicted RBP12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 UBE2FQ969M7 185 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 MYEOVQ96EZ4 313 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SRRQ9GZT4 340 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 RACGAP1Q9H0H5 632 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC39A1Q9NY26 324 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
SYNGAP1-204ENST00000449372 MKI67P46013 3256 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 RNGTTO60942 597 aaKnown RBP12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 ECI2O75521 394 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 MAD2L1BPQ15013 274 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 HKDC1Q2TB90 917 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 KLHL17Q6TDP4 642 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 P3H2Q8IVL5 708 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 IGSF8Q969P0 613 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 GPR137Q96N19 417 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 ADGRE3Q9BY15 652 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 C3orf14Q9HBI5 128 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 HSMCR30P0CW71 290 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 RRASP10301 218 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 CD9P21926 228 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRMT2P55345 433 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 MTPNP58546 118 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 UFM1P61960 85 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 DSC2Q02487 901 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 CDYL2Q8N8U2 506 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC13A3Q8WWT9 602 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 AP2M1Q96CW1 435 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 PLXNA4Q9HCM2 1894 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 KIAA1671Q9BY89 1806 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 A0A075B6Q4 140 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 RETP07949 1114 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 FHP07954 510 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 KEAP1Q14145 624 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 NADSYN1Q6IA69 706 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 MILR1Q7Z6M3 343 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 PCDHB1Q9Y5F3 818 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 STON1Q9Y6Q2 735 aa12.98□□□□□ -0.33
SYNGAP1-204ENST00000449372 GMDSO60547 372 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 SLC2A4P14672 509 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PTX3P26022 381 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 RAB14P61106 215 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 RING1Q06587 406 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CYP4F3Q08477 520 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CYP27C1Q4G0S4 372 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ZNF431Q8TF32 576 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PPM1MQ96MI6 270 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 CINPQ9BW66 212 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 SMPD4Q9NXE4 827 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 KLF2Q9Y5W3 355 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 MRPL42Q9Y6G3 142 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 ANAPC1Q9H1A4 1944 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 MYL12BO14950 172 aa12.97□□□□□ -0.33
SYNGAP1-204ENST00000449372 PRR35P0CG20 571 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms