RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 SPANXN3Q5MJ09 141 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 PAQR3Q6TCH7 311 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 GALNTL5Q7Z4T8 443 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 SIAH3Q8IW03 269 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 CNTN4Q8IWV2 1026 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 OR56A3Q8NH54 315 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 ADAMTS18Q8TE60 1221 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 TMEM125Q96AQ2 219 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 ALKBH8Q96BT7 664 aaKnown RBP10.92□□□□□ -0.66
COPS7B-213ENST00000449174 MTFMTQ96DP5 389 aaKnown RBP10.92□□□□□ -0.66
COPS7B-213ENST00000449174 LINGO1Q96FE5 620 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 SNF8Q96H20 258 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 NDNQ99608 321 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 CDCP1Q9H5V8 836 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 ZFP69BQ9UJL9 534 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 NPIPA1Q9UND3 350 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 SH2B3Q9UQQ2 575 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 JRKLQ9Y4A0 524 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 OTOGQ6ZRI0 2925 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 CNTRLQ7Z7A1 2325 aa10.92□□□□□ -0.66
COPS7B-213ENST00000449174 SVILO95425 2214 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 GOLGA6L10A0A0M3HER8 536 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 SYNDIG1LA6NDD5 238 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 OR2W5A6NFC9 320 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 SAGE2PA6NJ88 616 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 E9PLN8 166 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 CHST10O43529 356 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PRMT3O60678 531 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 F7P08709 466 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 POU3F2P20265 443 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 TPP2P29144 1249 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 FNTAP49354 379 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PDAP1Q13442 181 aaKnown RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 CSHL1Q14406 222 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 MAPKAPK3Q16644 382 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PHKG1Q16816 387 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 DEFB134Q4QY38 66 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 MBOAT1Q6ZNC8 495 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 ARMC10Q8N2F6 343 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 AGGF1Q8N302 714 aaeCLIP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 TRPV3Q8NET8 790 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 OR5T3Q8NGG3 340 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 TSLPQ969D9 159 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 FBXL8Q96CD0 374 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 C14orf79Q96F83 325 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PTCHD1Q96NR3 888 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 SPOCK3Q9BQ16 436 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 VKORC1Q9BQB6 163 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 TRIM51Q9BSJ1 452 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 HES7Q9BYE0 225 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 RBCK1Q9BYM8 510 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 PRDM9Q9NQV7 894 aa10.91□□□□□ -0.66
COPS7B-213ENST00000449174 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 NCOA6Q14686 2063 aaPredicted RBP10.91□□□□□ -0.66
COPS7B-213ENST00000449174 TCRBV16S1A1N1A0A5B0 115 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 KLRC4-KLRK1H3BQV0 150 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 PSMD12O00232 456 aaPredicted RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 PGRMC1O00264 195 aaKnown RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 MAN1A2O60476 641 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 SNRPB2P08579 225 aaKnown RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 ZNF888P0CJ79 500 aaPredicted RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 SCTRP47872 440 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 HLCSP50747 726 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 CDKN2DP55273 166 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 MLF1P58340 268 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 TIAL1Q01085 375 aaKnown RBP eCLIP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 TERF2Q15554 542 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 BBS9Q3SYG4 887 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 RNASEH2BQ5TBB1 312 aaKnown RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 AMER2Q8N7J2 671 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 AGAP11Q8TF27 550 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 SLC5A11Q8WWX8 675 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 PYCR2Q96C36 320 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 AIF1LQ9BQI0 150 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 TSPAN10Q9H1Z9 355 aaPredicted RBP10.9□□□□□ -0.66
COPS7B-213ENST00000449174 PELI2Q9HAT8 420 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 COQ3Q9NZJ6 369 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 DYRK1BQ9Y463 629 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 CSMD1Q96PZ7 3565 aa10.9□□□□□ -0.66
COPS7B-213ENST00000449174 PDZD2O15018 2839 aa10.9□□□□□ -0.67
COPS7B-213ENST00000449174 IGKV3D-11A0A0A0MRZ8 115 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 B4GALT2O60909 372 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 AHSGP02765 367 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 SERPIND1P05546 499 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 RNH1P13489 461 aaKnown RBP10.89□□□□□ -0.67
COPS7B-213ENST00000449174 GSTM2P28161 218 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 GABRB3P28472 473 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 CLCN2P51788 898 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 PPP1R7Q15435 360 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 KCTD19Q17RG1 926 aaPredicted RBP10.89□□□□□ -0.67
COPS7B-213ENST00000449174 RBM20Q5T481 1227 aaKnown RBP10.89□□□□□ -0.67
COPS7B-213ENST00000449174 FAM45BPQ6NSW5 357 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 LRRC8AQ8IWT6 810 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 ZNF295-AS1Q8N0V1 137 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 SHISA5Q8N114 240 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
COPS7B-213ENST00000449174 FAM45AQ8TCE6 357 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms