RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 ALOX12BO75342 701 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 JRKO75564 520 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 ONECUT2O95948 504 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 GSTA1P08263 222 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 CD63P08962 238 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 KRT4P19013 534 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 TAC1P20366 129 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 HNRNPH1P31943 449 aaKnown RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 PIK3CGP48736 1102 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 LAPTM5Q13571 262 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 HERC3Q15034 1050 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 RBBP7Q16576 425 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 HIST2H2ACQ16777 129 aaPredicted RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 FAM219BQ5XKK7 198 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 HIST2H2AA3Q6FI13 130 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 FAAH2Q6GMR7 532 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 GRHL2Q6ISB3 625 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 MED27Q6P2C8 311 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 PPP1R32Q7Z5V6 425 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 LCA5Q86VQ0 697 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 RNF175Q8N4F7 328 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 TMEM151AQ8N4L1 468 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 MREGQ8N565 214 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 TTLQ8NG68 377 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 OR52B6Q8NGF0 335 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 OR51Q1Q8NH59 317 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 APOBEC4Q8WW27 367 aaKnown RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 PEX11GQ96HA9 241 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 MESP1Q9BRJ9 268 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 FAM117AQ9C073 453 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 NOL11Q9H8H0 719 aaKnown RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 NXT1Q9UKK6 140 aaKnown RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 EMCNQ9ULC0 261 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 ZNF490Q9ULM2 529 aaPredicted RBP11.29□□□□□ -0.6
RFC4-208ENST00000447345 KCNMB2Q9Y691 235 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 SLC22A7Q9Y694 548 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 URADA6NGE7 173 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 VSTM2BA6NLU5 285 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 ATXN7O15265 892 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 ERI3O43414 337 aaKnown RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 DLX3O60479 287 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 DNAJB6O75190 326 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CLEC3AO75596 197 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 WFS1O76024 890 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 PRB1P04280 392 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 SERPINA6P08185 405 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 RPS17P08708 135 aaKnown RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 XCR1P46094 333 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CCNG1P51959 295 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 PLA2G16P53816 162 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CDH13P55290 713 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 STXBP1P61764 594 aaKnown RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 SSPNQ14714 243 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 RASA2Q15283 850 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 TBCCQ15814 346 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CPSF6Q16630 551 aaKnown RBP eCLIP11.28□□□□□ -0.6
RFC4-208ENST00000447345 KRT71Q3SY84 523 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 MINDY4Q4G0A6 757 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 AFAP1L2Q8N4X5 818 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 PPP4R1Q8TF05 950 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 THAP4Q8WY91 577 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 GAL3ST3Q96A11 431 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 TMEM237Q96Q45 408 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 RHBGQ9H310 441 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 NT5DC2Q9H857 520 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 MKKSQ9NPJ1 570 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
RFC4-208ENST00000447345 C14orf105Q9NVL8 296 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 LGALS13Q9UHV8 139 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 HS3ST3B1Q9Y662 390 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 BOD1L1Q8NFC6 3051 aa11.28□□□□□ -0.6
RFC4-208ENST00000447345 IGLV3-12A0A075B6K2 115 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 LRIT2A6NDA9 550 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 OR2W5A6NFC9 320 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 IDSB3KWA1 339 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 SAP18O00422 153 aaKnown RBP11.27□□□□□ -0.61
RFC4-208ENST00000447345 PEX12O00623 359 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 SPAG7O75391 227 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 SUPT7LO94864 414 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 TBX6O95947 436 aaPredicted RBP11.27□□□□□ -0.61
RFC4-208ENST00000447345 RECKO95980 971 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 PROCP04070 461 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 TUBBP07437 444 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 HEXBP07686 556 aa11.27□□□□□ -0.61
RFC4-208ENST00000447345 MYL2P10916 166 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms