RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 RBM34P42696 430 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 GSCP56915 257 aaPredicted RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 RAB15P59190 212 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CDK6Q00534 326 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 MALLQ13021 153 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ABHD17BQ5VST6 288 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 CEACAM20Q6UY09 585 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SPPL2CQ8IUH8 684 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF676Q8N7Q3 588 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 VN1R2Q8NFZ6 395 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 SLC7A11Q9UPY5 501 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 MGAT4BQ9UQ53 548 aa8.27□□□□□ -1.09
PTPN3-204ENST00000446349 IGKV6-21A0A0C4DH24 114 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ENO4A6NNW6 628 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 KHNYNO15037 678 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 AXIN1O15169 862 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ENTPD6O75354 484 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 HK1P19367 917 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 SLC6A9P48067 706 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ARPC4P59998 168 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 IL18Q14116 193 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 EIF5AL1Q6IS14 154 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 FAM131AQ6UXB0 335 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 USP30Q70CQ3 517 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 C1orf52Q8N6N3 182 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 RDH12Q96NR8 316 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 GFM1Q96RP9 751 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 A0A1W2PP55 124 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 CAPN8A6NHC0 703 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 J3KR12 359 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PRKCHP24723 683 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 C5orf22Q49AR2 442 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 UBAP2Q5T6F2 1119 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PYHIN1Q6K0P9 492 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 OR2L3Q8NG85 312 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 GNPDA2Q8TDQ7 276 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PRKAB1Q9Y478 270 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 A8MUI8 341 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 FOXE1O00358 373 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 MANBAO00462 879 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 STC2O76061 302 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ECHS1P30084 290 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ACTC1P68032 377 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ACTA1P68133 377 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 POU4F2Q12837 409 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 GAS6Q14393 721 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 QPCTQ16769 361 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 METTL2AQ96IZ6 378 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 NODALQ96S42 347 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 BAIAP2Q9UQB8 552 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 GFRA2O00451 464 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 UGDHO60701 494 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 B4GALT2O60909 372 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ADAMTS4O75173 837 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PGRP06401 933 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ITGB7P26010 798 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 MECP2P51608 486 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 RRADP55042 308 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PPM1JQ5JR12 505 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 VASH1Q7L8A9 365 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 CEP97Q8IW35 865 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF781Q8N8C0 355 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ENY2Q9NPA8 101 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 NGBQ9NPG2 151 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ADAMTS5Q9UNA0 930 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 SPO11Q9Y5K1 396 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 HEMK1Q9Y5R4 338 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 TEX264Q9Y6I9 313 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 A0A1B0GVI7 797 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 FAM240BA0A1B0GVZ2 78 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 EMC8O43402 210 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 TGM5O43548 720 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ARHGAP19Q14CB8 494 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 TNFAIP8L2Q6P589 184 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 GOLGA7Q7Z5G4 137 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ZNF548Q8NEK5 533 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 SEC14L1Q92503 715 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 BORCS5Q969J3 196 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 LPAR4Q99677 370 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 DENND2DQ9H6A0 471 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 WDR55Q9H6Y2 383 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PPP4R1LQ9P1A2 415 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 HTR3EA5X5Y0 456 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 KDM4BO94953 1096 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PGM3O95394 542 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 RLN1P04808 185 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 F8A1P23610 371 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 NFE2L1Q14494 772 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 OCLNQ16625 522 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PLEKHG7Q6ZR37 379 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 USP43Q70EL4 1123 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 TICAM1Q8IUC6 712 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 LRRC58Q96CX6 371 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 PGAP3Q96FM1 320 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ARL5BQ96KC2 179 aa8.26□□□□□ -1.09
PTPN3-204ENST00000446349 ADAD1Q96M93 576 aaKnown RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 BHLHE41Q9C0J9 482 aaPredicted RBP8.26□□□□□ -1.09
PTPN3-204ENST00000446349 VSTM2BA6NLU5 285 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms