RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 IFT22Q9H7X7 185 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 TXNL1O43396 289 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SLC25A27O95847 323 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MBTD1Q05BQ5 628 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SLC39A12Q504Y0 691 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 FTMTQ8N4E7 242 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CD300LFQ8TDQ1 290 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 AARSD1Q9BTE6 412 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 C5orf51A6NDU8 294 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 RAF1P04049 648 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 PAFAH1B3Q15102 231 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 MAMDC4Q6UXC1 1216 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 WASH2PQ6VEQ5 465 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 FAM83AQ86UY5 434 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 DNAJC22Q8N4W6 341 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 DEFB129Q9H1M3 183 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SCP2D1Q9UJQ7 156 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CEBPGP53567 150 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CAPN13Q6MZZ7 669 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 PYCR2Q96C36 320 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CACNG2Q9Y698 323 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 AKR7A2O43488 359 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 LDOC1O95751 146 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 MT-ND5P03915 603 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 HIST1H2ABP04908 130 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 HLA-DMAP28067 261 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TAPT1Q6NXT6 567 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 HIST3H2AQ7L7L0 130 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 KCTD20Q7Z5Y7 419 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 HIST1H2ACQ93077 130 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TPT1P8Q9HAU6 139 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SDHAF2Q9NX18 166 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SULT1B1O43704 296 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 GIFP27352 417 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TUBB3Q13509 450 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TAF1AQ15573 450 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 PAQR7Q86WK9 346 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 C12orf45Q8N5I9 185 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 GGHQ92820 318 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 HMCESQ96FZ2 354 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MTERF1Q99551 399 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 THAP7Q9BT49 309 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 DNAJC15Q9Y5T4 150 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 C17orf102A2RUQ5 167 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 EGFRP00533 1210 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 IFNA17P01571 189 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 BCL2L1Q07817 233 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 PCBP1Q15365 356 aaKnown RBP eCLIP7.62□□□□□ -1.191e-7■■■■□ 23.7
SMG1-202ENST00000446231 PCDHB1Q9Y5F3 818 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TEX13CA0A0J9YWL9 993 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 ANKRD28O15084 1053 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CPNE6O95741 557 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 JUNP05412 331 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 CDH11P55287 796 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 FBXW4P57775 412 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CLDN10P78369 228 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 FAM182BQ5T319 152 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 PEX13Q92968 403 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MYO5BQ9ULV0 1848 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 APBA3O96018 575 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 PIGRP01833 764 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 UBL4AP11441 157 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 DGKGP49619 791 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CTU2Q2VPK5 515 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 SVBPQ8N300 66 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 FAM98AQ8NCA5 519 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 ARMC5Q96C12 935 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 NELL2Q99435 816 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 DUSP26Q9BV47 211 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 PCDHB14Q9Y5E9 798 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 GPR45Q9Y5Y3 372 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MYOM1P52179 1685 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SH2D5Q6ZV89 423 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 OR5T2Q8NGG2 359 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 RGCCQ9H4X1 137 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 DUS2Q9NX74 493 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 ACTR10Q9NZ32 417 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 ANXA2P2A6NMY6 339 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 H7C4K7 107 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 ANXA2P07355 339 aaKnown RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 DDCP20711 480 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CLEC14AQ86T13 490 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 CRYBG2Q8N1P7 616 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 OR6C4Q8NGE1 309 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 OR51V1Q9H2C8 321 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MTG2Q9H4K7 406 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 LOC730098B7Z3J9 87 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 GADD45GO95257 159 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 RABGGTBP53611 331 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 GPR151Q8TDV0 419 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 SLC35F4A4IF30 521 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 TOR1AO14656 332 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 MATN4O95460 622 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 EPCAMP16422 314 aa7.62□□□□□ -1.19
SMG1-202ENST00000446231 GBX2P52951 348 aaPredicted RBP7.62□□□□□ -1.19
SMG1-202ENST00000446231 TAC4Q86UU9 113 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms