RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 LHPPQ9H008 270 aa17.61■□□□□ 0.41
CCDC188-202ENST00000444532 BSNQ9UPA5 3926 aa17.61■□□□□ 0.41
CCDC188-202ENST00000444532 DOCK10Q96BY6 2186 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 BAHCC1Q9P281 2608 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 NSG1A0A0A6YYJ2 146 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 C8orf89P0DMQ9 161 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 SMIM10L1P0DMW3 83 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 COX6A1P12074 109 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 MTHFD2P13995 350 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 HPDP32754 393 aaPredicted RBP17.6■□□□□ 0.41
CCDC188-202ENST00000444532 CASP2P42575 452 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 MAGEA12P43365 314 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 STXBP1P61764 594 aaKnown RBP17.6■□□□□ 0.41
CCDC188-202ENST00000444532 DOC2AQ14183 400 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 TBCCQ15814 346 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 DEFB134Q4QY38 66 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 XKR6Q5GH73 641 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 FAAH2Q6GMR7 532 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 PARP9Q8IXQ6 854 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCDC188-202ENST00000444532 EIF1ADQ8N9N8 165 aaKnown RBP17.6■□□□□ 0.41
CCDC188-202ENST00000444532 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
CCDC188-202ENST00000444532 DCAKDQ8WVC6 231 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 TM9SF4Q92544 642 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 SMIM10Q96HG1 83 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 GPR78Q96P69 363 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 MESP1Q9BRJ9 268 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 EFCAB11Q9BUY7 163 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 VPS11Q9H270 941 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 L2HGDHQ9H9P8 463 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 ZNF160Q9HCG1 818 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 OPTCQ9UBM4 332 aa17.6■□□□□ 0.41
CCDC188-202ENST00000444532 IGHV1-45A0A0A0MS14 117 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 EXOC1LA0A1B0GW35 172 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 ANKDD1BA6NHY2 528 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 K7EPI3 171 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 PRAMEF4O60810 478 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 JRKO75564 520 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 CLEC3AO75596 197 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 COL6A2P12110 1019 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 EPORP19235 508 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 GLRBP48167 497 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 IRF8Q02556 426 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 PCDH1Q08174 1060 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 Q0VFX4 171 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 E2F2Q14209 437 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 HIST2H2ACQ16777 129 aaPredicted RBP17.59■□□□□ 0.41
CCDC188-202ENST00000444532 MINDY4Q4G0A6 757 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 NADK2Q4G0N4 442 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 PAGE2BQ5JRK9 111 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 TOR1AIP1Q5JTV8 583 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 LGSNQ5TDP6 509 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 MFSD4BQ5TF39 518 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 AGAP7PQ5VUJ5 663 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 PRAMEF9Q5VWM5 478 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 HIST2H2AA3Q6FI13 130 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 KBTBD2Q8IY47 623 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 THOC3Q96J01 351 aaKnown RBP17.59■□□□□ 0.41
CCDC188-202ENST00000444532 AGAP4Q96P64 663 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 TRIM4Q9C037 500 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 ZNF700Q9H0M5 742 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 KLHL31Q9H511 634 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 RIC8BQ9NVN3 520 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 C19orf25Q9UFG5 118 aaPredicted RBP17.59■□□□□ 0.41
CCDC188-202ENST00000444532 ZNF490Q9ULM2 529 aaPredicted RBP17.59■□□□□ 0.41
CCDC188-202ENST00000444532 ASB1Q9Y576 335 aa17.59■□□□□ 0.41
CCDC188-202ENST00000444532 LRIT2A6NDA9 550 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 ZNF860A6NHJ4 632 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 RIPK2O43353 540 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 CHST10O43529 356 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 KLK8O60259 260 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 WFS1O76024 890 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 WISP1O95388 367 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 SNRPAP09012 282 aaKnown RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 RBP1P09455 135 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 ICAM2P13598 275 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 EPB42P16452 691 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 HNF4AP41235 474 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 AGTR2P50052 363 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 EFNA3P52797 238 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 ALDH18A1P54886 795 aaKnown RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 RAB8AP61006 207 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 AP2B1P63010 937 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 EEF1A2Q05639 463 aaKnown RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 CHIT1Q13231 466 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 SETDB1Q15047 1291 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 COLEC12Q5KU26 742 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 JMJD6Q6NYC1 403 aaPredicted RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 CNPY4Q8N129 248 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 RBMXL3Q8N7X1 1067 aaKnown RBP17.58■□□□□ 0.4
CCDC188-202ENST00000444532 OR5T3Q8NGG3 340 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 GAL3ST3Q96A11 431 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 TBC1D20Q96BZ9 403 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 PEX11GQ96HA9 241 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 RHBGQ9H310 441 aa17.58■□□□□ 0.4
CCDC188-202ENST00000444532 TRIM49D1C9J1S8 452 aa17.57■□□□□ 0.4
CCDC188-202ENST00000444532 ZNF500O60304 480 aaPredicted RBP17.57■□□□□ 0.4
CCDC188-202ENST00000444532 B3GALT4O96024 378 aa17.57■□□□□ 0.4
CCDC188-202ENST00000444532 FHP07954 510 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms