RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CASQ1P31415 396 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CCR1P32246 355 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 THOP1P52888 689 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 SP3Q02447 781 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 FOXF2Q12947 444 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 DAZAP2Q15038 168 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 PHKG1Q16816 387 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ZSWIM7Q19AV6 140 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ODF4Q2M2E3 257 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 LSM12Q3MHD2 195 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ITPRIPL2Q3MIP1 535 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 TYW3Q6IPR3 259 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 MIS18BP1Q6P0N0 1132 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC39A4Q6P5W5 647 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 TRIM65Q6PJ69 517 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 METAP1DQ6UB28 335 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 G2E3Q7L622 706 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CPEB2Q7Z5Q1 589 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 YRDCQ86U90 279 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC22A9Q8IVM8 553 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CCDC60Q8IWA6 550 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 GPALPP1Q8IXQ4 340 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 C7orf57Q8NEG2 295 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 OR8J1Q8NGP2 316 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 OLIG1Q8TAK6 271 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 GOLGA5Q8TBA6 731 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 OSTF1Q92882 214 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 TSACCQ96A04 125 aaPredicted RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 RAB39BQ96DA2 213 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CSF3RQ99062 836 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 CCDC3Q9BQI4 270 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 GANQ9H2C0 597 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 RAVER2Q9HCJ3 691 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 DDX28Q9NUL7 540 aaKnown RBP4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 SMPD4Q9NXE4 827 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ERVK-19Q9WJR5 959 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 ATG4BQ9Y4P1 393 aa4.84□□□□□ -1.63
TM9SF3-202ENST00000443638 NCANO14594 1321 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 A0A0U1RQS6 177 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 A0A1W2PRB8 838 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 RNF222A6NCQ9 220 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 SERINC4A6NH21 518 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 BECN2A8MW95 431 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 H0YC42 278 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 EEF2KO00418 725 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PRRG2O14669 202 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ZNF197O14709 1029 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CHEK1O14757 476 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 WDR1O75083 606 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CLN5O75503 358 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ECI2O75521 394 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 IL1BP01584 269 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CT45A8P0DMV1 189 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CT45A9P0DMV2 189 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 MYOD1P15172 320 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 GNSP15586 552 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ITGB6P18564 788 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 MAKP20794 623 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ATP6V1C1P21283 382 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 SSTR2P30874 369 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CA8P35219 290 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 RFC4P35249 363 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 OR3A3P47888 321 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PDX1P52945 283 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 NLRP11P59045 1033 aaKnown RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 B3GALT5-AS1P59052 145 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ACTR3P61158 418 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PITX1P78337 314 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CNTN2Q02246 1040 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 SRSF1Q07955 248 aaKnown RBP eCLIP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 TAF10Q12962 218 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 MFAP5Q13361 173 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ODF3L2Q3SX64 289 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CT45A2Q5DJT8 189 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CMPK2Q5EBM0 449 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CEP78Q5JTW2 689 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 NDUFAF5Q5TEU4 345 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 LRRC8BQ6P9F7 803 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CBLN3Q6UW01 205 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CCNI2Q6ZMN8 369 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CYP4V2Q6ZWL3 525 aaPredicted RBP4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 BNIPLQ7Z465 357 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 LONP2Q86WA8 852 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PRSS35Q8N3Z0 413 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 GPRC5AQ8NFJ5 357 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 SEPT8Q92599 483 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 P3H4Q92791 437 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 TPD52L3Q96J77 140 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 LRR1Q96L50 414 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 RAB40CQ96S21 281 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 C1QTNF7Q9BXJ2 289 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 RDH8Q9NYR8 311 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 B9D1Q9UPM9 204 aa4.83□□□□□ -1.64
TM9SF3-202ENST00000443638 CHMP2BQ9UQN3 213 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms