RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 VTNP04004 478 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 OR56A5P0C7T3 313 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ARSBP15848 533 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PPIBP23284 216 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 ACSL1P33121 698 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PUDPQ08623 228 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ARHGEF7Q14155 803 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CATSPERGQ6ZRH7 1159 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 Q6ZSR9 355 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CHMP1BQ7LBR1 199 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 STK40Q8N2I9 435 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ATP6V1C2Q8NEY4 427 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 REPS1Q96D71 796 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ZIC5Q96T25 663 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC13A4Q9UKG4 626 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PCDHGA6Q9Y5G7 932 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CIB4A0PJX0 185 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PRSS44E7EML9 344 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 EPB42P16452 691 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ZNF30P17039 623 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 AKAP5P24588 427 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CSRP3P50461 194 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 IDNKQ5T6J7 187 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 METAP1DQ6UB28 335 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 PNPLA1Q8N8W4 532 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 HRASLS5Q96KN8 279 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FOPNLQ96NB1 174 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 POPDC3Q9HBV1 291 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 UBR1Q8IWV7 1749 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CA12O43570 354 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PRPS1L1P21108 318 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PCDH1Q08174 1060 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 NFE2L1Q14494 772 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 GLT6D1Q7Z4J2 308 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 IFNL1Q8IU54 200 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
HERC1-201ENST00000443617 POF1BQ8WVV4 589 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PCNPQ8WW12 178 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 DOHHQ9BU89 302 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FAM8A1Q9UBU6 413 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CHURC1-FNTBB4DL54 471 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 RECQL4O94761 1208 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 LPOP22079 712 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 CTBP2P56545 445 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 IRF3Q14653 427 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC14A2Q15849 920 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ZMAT1Q5H9K5 638 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 DENND1CQ8IV53 801 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 MSRB3Q8IXL7 192 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 OR2T35Q8NGX2 323 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC9A6Q92581 669 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SENP8Q96LD8 212 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 KCNH6Q9H252 994 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TBC1D17Q9HA65 648 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 NUDT15Q9NV35 164 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SCP2D1Q9UJQ7 156 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 hCG_1807616A0A1W2PRN6 198 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 MTHFD2P13995 350 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TSPAN5P62079 268 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SERPINA11Q86U17 422 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 COQ8AQ8NI60 647 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 HMCESQ96FZ2 354 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GPR20Q99678 358 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 EVA1BQ9NVM1 165 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CABIN1Q9Y6J0 2220 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SLC19A1P41440 591 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CRISP3P54108 245 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 VMACQ2NL98 169 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 C18orf21Q32NC0 220 aaPredicted RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 CREB3L4Q8TEY5 395 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 RADILQ96JH8 1075 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 NT5DC2Q9H857 520 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 F8W810 466 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FZD9O00144 591 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 KPNA5O15131 536 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 PRPS2P11908 318 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ENPP1P22413 925 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 NNMTP40261 264 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ELOAQ14241 798 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 GPR176Q14439 515 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 KDELC1Q6UW63 502 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 EEF1AKMT1Q8WVE0 214 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 IMP4Q96G21 291 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 GDF15Q99988 308 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SH3BP4Q9P0V3 963 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FEN1P39748 380 aaKnown RBP4.84□□□□□ -1.63
HERC1-201ENST00000443617 MAXP61244 160 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CPSF6Q16630 551 aaKnown RBP eCLIP4.84□□□□□ -1.63
HERC1-201ENST00000443617 USP45Q70EL2 814 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 GALNT10Q86SR1 603 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CLDN22Q8N7P3 220 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 DNAJC5GQ8N7S2 189 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 CSGALNACT1Q8TDX6 532 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 FBXW5Q969U6 566 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 TMEM175Q9BSA9 504 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 SMIM30A4D0T7 59 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 MGAT4DA6NG13 374 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 IFNW1P05000 195 aa4.84□□□□□ -1.63
HERC1-201ENST00000443617 HMBSP08397 361 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms