RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 NEDD4P46934 1319 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 hCG_38984A0A1B0GV85 526 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 HMGB1P1B2RPK0 211 aaPredicted RBP3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 CCDC188H7C350 402 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 FOLR2P14207 255 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 FDPSP14324 419 aaKnown RBP3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 C4BPBP20851 252 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 EDNRAP25101 427 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 GPR183P32249 361 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 FKBP3Q00688 224 aaKnown RBP3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 PEX6Q13608 980 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 C1orf141Q5JVX7 400 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 SLC25A30Q5SVS4 291 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 C11orf57Q6ZUT1 292 aaPredicted RBP3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 SH2D6Q7Z4S9 175 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 PRUNE1Q86TP1 453 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 PRSS35Q8N3Z0 413 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 OR9Q2Q8NGE9 314 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 KIF18AQ8NI77 898 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 CASP10Q92851 521 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 FER1L6-AS2Q96M78 137 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 ATF6BQ99941 703 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 OR10A4Q9H209 315 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 EXOC1Q9NV70 894 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 FAM120CQ9NX05 1096 aaKnown RBP3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 GTSE1Q9NYZ3 720 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 SNX7Q9UNH6 387 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 STYXL1Q9Y6J8 313 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 HCFC1P51610 2035 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 SHROOM2Q13796 1616 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
AC003001.1-201ENST00000443247 E5RGE8 158 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 TRAFD1O14545 582 aaPredicted RBP3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 BCL2L11O43521 198 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 PLOD3O60568 738 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 SPP1P10451 314 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 PKLRP30613 574 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 IL10RBQ08334 325 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 ZNF146Q15072 292 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 UGCGQ16739 394 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 C6orf136Q5SQH8 315 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 DHRS11Q6UWP2 260 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 TIPARPQ7Z3E1 657 aaKnown RBP3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 C5orf24Q7Z6I8 188 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 DNAJB7Q7Z6W7 309 aaPredicted RBP3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 RNF130Q86XS8 419 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 HPS6Q86YV9 775 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 CROCCP3Q8IVE0 287 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 OR4N5Q8IXE1 308 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 GRK7Q8WTQ7 553 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 TOMM40LQ969M1 308 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 IL12RB2Q99665 862 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 IARS2Q9NSE4 1012 aaKnown RBP3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 AGTPBP1Q9UPW5 1226 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 NSG2Q9Y328 171 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 SYNJ2O15056 1496 aa3.46□□□□□ -1.86
AC003001.1-201ENST00000443247 RNF123Q5XPI4 1314 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 MAPKBP1O60336 1514 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 TOP2BQ02880 1626 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 IQCMA0A1B0GVH7 501 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 ANXA2P2A6NMY6 339 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 TMEM150CB9EJG8 249 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 PRSS46E5RG02 174 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 KIF5CO60282 957 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 LRCH4O75427 683 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 MTRF1O75570 445 aaKnown RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 PCP11498 1178 aaKnown RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 PTAFRP25105 342 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 SSTR1P30872 391 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 CRKLP46109 303 aaKnown RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 GMPSP49915 693 aaPredicted RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 NPY4RP50391 375 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 ATP4BP51164 291 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 ERVK-16P61578 105 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 BTG1P62324 171 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 TNK1Q13470 666 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 UPP1Q16831 310 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 SPANXN4Q5MJ08 99 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 BTNL8Q6UX41 500 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 MACC1Q6ZN28 852 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 PHC2Q8IXK0 858 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 SPPL2AQ8TCT8 520 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 RAD54LQ92698 747 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 RAB9BQ9NP90 201 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 PRR34Q9NV39 138 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 TERF2IPQ9NYB0 399 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 NFKBIL1Q9UBC1 381 aaPredicted RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 KLK11Q9UBX7 282 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 RUVBL2Q9Y230 463 aaKnown RBP3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 ADGRL1O94910 1474 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 SPATA31D1Q6ZQQ2 1576 aa3.45□□□□□ -1.86
AC003001.1-201ENST00000443247 CEP170Q5SW79 1584 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 POLA1P09884 1462 aaPredicted RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 TRAV18A0A075B6X5 111 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 NKX6-3A6NJ46 265 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 PPIP5K2O43314 1243 aa3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 GALR3O60755 368 aaPredicted RBP3.44□□□□□ -1.86
AC003001.1-201ENST00000443247 GIFP27352 417 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms