RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-208	ENST00000443046	EIF2B3	Q9NR50	452 aa	Known RBP	13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	ABCF3	Q9NUQ8	709 aa		13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	AMFR	Q9UKV5	643 aa		13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	SH2B3	Q9UQQ2	575 aa		13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.45	□□□□□ -0.26
HMGN1-208	ENST00000443046	IGKV3D-11	A0A0A0MRZ8	115 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	FAM237B	A0A1B0GVD1	139 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZNF860	A6NHJ4	632 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	SAGE2P	A6NJ88	616 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	GOLGA8K	D6RF30	607 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	GOLGA8T	H3BQL2	631 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	FCHO1	O14526	889 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	PROM1	O43490	865 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	GALR3	O60755	368 aa	Predicted RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	OGN	P20774	298 aa	Known RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	ANP32A	P39687	249 aa	Known RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	ADAM8	P78325	824 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	HERC3	Q15034	1050 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	CEBPE	Q15744	281 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	GXYLT1	Q4G148	440 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	MEI1	Q5TIA1	1274 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	CAPN13	Q6MZZ7	669 aa	Predicted RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	QSOX2	Q6ZRP7	698 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	PEX26	Q7Z412	305 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	SPNS2	Q8IVW8	549 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	PRELID2	Q8N945	189 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	APCDD1L	Q8NCL9	501 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	POLDIP3	Q9BY77	421 aa	Known RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZDHHC11	Q9H8X9	412 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	DEPP	Q9NTK1	212 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	PAK5	Q9P286	719 aa		13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	DRG1	Q9Y295	367 aa	Known RBP	13.44	□□□□□ -0.26
HMGN1-208	ENST00000443046	FN1	P02751	2386 aa	Known RBP	13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZAN	Q9Y493	2812 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	TCRBV16S1A1N1	A0A5B0	115 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PFDN6	O15212	129 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	CHST10	O43529	356 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZBTB14	O43829	449 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PDE9A	O76083	593 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	SYF2	O95926	243 aa	Known RBP	13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	RPL22	P35268	128 aa	Known RBP	13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	TBPL1	P62380	186 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	BTG2	P78543	158 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	RTL6	Q6ICC9	239 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	CES3	Q6UWW8	571 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	CILP2	Q8IUL8	1156 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	OTUD6B	Q8N6M0	293 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	MFSD9	Q8NBP5	474 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZNF740	Q8NDX6	193 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	MYRIP	Q8NFW9	859 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	MBD6	Q96DN6	1003 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	HES6	Q96HZ4	224 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PTCHD1	Q96NR3	888 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	TTYH2	Q9BSA4	534 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	DEFB126	Q9BYW3	111 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PCBD2	Q9H0N5	130 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	DEFB127	Q9H1M4	99 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	RASSF1	Q9NS23	344 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PNPLA3	Q9NST1	481 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	BFAR	Q9NZS9	450 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	SOX13	Q9UN79	622 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	PPIE	Q9UNP9	301 aa	Known RBP	13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZNF148	Q9UQR1	794 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	FAM215A	Q9Y5M1	114 aa		13.43	□□□□□ -0.26
HMGN1-208	ENST00000443046	FBN1	P35555	2871 aa	Known RBP	13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046		A0A0G2JNJ9	132 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046		E5RI56	91 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	AP3B1	O00203	1094 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	SLC35G6	P0C7Q6	338 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZSCAN5DP	P0CG00	497 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	GLI4	P10075	376 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	ENO3	P13929	434 aa	Predicted RBP	13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	JAK1	P23458	1154 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	ACVR2A	P27037	513 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	GPR85	P60893	370 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	CUL1	Q13616	776 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	TTLL9	Q3SXZ7	439 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	ZNF549	Q6P9A3	640 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	ARSK	Q6UWY0	536 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	LIX1L	Q8IVB5	337 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	CYP4Z2P	Q8N1L4	340 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	OR4K1	Q8NGD4	311 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	OR5M3	Q8NGP4	307 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	INTS10	Q9NVR2	710 aa	Known RBP	13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	SYBU	Q9NX95	663 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046		Q9UFV3	132 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046	DHRS7	Q9Y394	339 aa		13.42	□□□□□ -0.26
HMGN1-208	ENST00000443046		A0A1B0GVC2	190 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	PINLYP	A6NC86	204 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	OR14I1	A6ND48	311 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	NPIPA2	E9PIF3	369 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	NPIPA3	F8WFD2	350 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	B4GALT2	O60909	372 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	IGHG3	P01860	377 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	ALOX12	P18054	663 aa		13.41	□□□□□ -0.26
HMGN1-208	ENST00000443046	DNASE1	P24855	282 aa		13.41	□□□□□ -0.26

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