RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 MLIPQ5VWP3 458 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 HIST2H2AA3Q6FI13 130 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 MRPL14Q6P1L8 145 aaKnown RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 C19orf48Q6RUI8 117 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 OVCH1Q7RTY7 1134 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 HDXQ7Z353 690 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 MILR1Q7Z6M3 343 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 TTLQ8NG68 377 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 WDR20Q8TBZ3 569 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 PPP4R1Q8TF05 950 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 CCT6BQ92526 530 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ATP6V1E2Q96A05 226 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 KIAA1143Q96AT1 154 aaPredicted RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 CCDC126Q96EE4 140 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 MMABQ96EY8 250 aaPredicted RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 SMIM10Q96HG1 83 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ACTL8Q9H568 366 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ZNF304Q9HCX3 659 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 TNFRSF12AQ9NP84 129 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 IFT80Q9P2H3 777 aaPredicted RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 CTSFQ9UBX1 484 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 FARSAQ9Y285 508 aaKnown RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 PCDHGA6Q9Y5G7 932 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ACTL7BQ9Y614 415 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 SLC22A7Q9Y694 548 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 LRIT2A6NDA9 550 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 ZNF860A6NHJ4 632 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 H0YIV9 168 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 SGK494L7N484 410 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 SH3BGRLO75368 114 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 KLF7O75840 302 aaPredicted RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 KLHL18O94889 574 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 OR4F21O95013 312 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 FURINP09958 794 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 ARL1P40616 181 aaPredicted RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 NEK2P51955 445 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 RAB8AP61006 207 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 MAGOHP61326 146 aaKnown RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 MAT1AQ00266 395 aaKnown RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 RGS1Q08116 209 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 NDUFA9Q16795 377 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 ADPRMQ3LIE5 342 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 ATP1A1-AS1Q5TC04 95 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 BROXQ5VW32 411 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 LIPMQ5VYY2 423 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 CES4AQ5XG92 561 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 PRMT9Q6P2P2 845 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 CCDC81Q6ZN84 652 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 FRMD7Q6ZUT3 714 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 UBE3DQ7Z6J8 389 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 HUS1BQ8NHY5 278 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 STARD8Q92502 1023 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 COL26A1Q96A83 441 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 MS4A6EQ96DS6 147 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 MVB12AQ96EY5 273 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 SLC45A3Q96JT2 553 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 F2RL3Q96RI0 385 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 ZNF382Q96SR6 550 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 GATA5Q9BWX5 397 aaPredicted RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 MS4A8Q9BY19 250 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 GPR87Q9BY21 358 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 FARSBQ9NSD9 589 aaKnown RBP15.2■□□□□ 0.02
USP39-205ENST00000442708 ZNF446Q9NWS9 450 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 NAALAD2Q9Y3Q0 740 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 PCDHGA11Q9Y5H2 935 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 SCN2AQ99250 2005 aa15.2■□□□□ 0.02
USP39-205ENST00000442708 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 A0A0G2JN53 185 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 K7ENP7 123 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 NKX2-8O15522 239 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 PRPF4O43172 522 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP39-205ENST00000442708 GALR3O60755 368 aaPredicted RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 RDH16O75452 317 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 NSA2O95478 260 aaKnown RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 OTCP00480 354 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 TGFB1P01137 390 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 UQCRHP07919 91 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 ALOX12P18054 663 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 FBLP22087 321 aaKnown RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 GSTM2P28161 218 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 LCP2Q13094 533 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 IL10RAQ13651 578 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 DDX39BQ13838 428 aaKnown RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 DSG2Q14126 1118 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 GGTA1PQ4G0N0 100 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 DEFB134Q4QY38 66 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 TCHHL1Q5QJ38 904 aaPredicted RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 ARHGAP40Q5TG30 622 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 INO80CQ6PI98 192 aaPredicted RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 ATG14Q6ZNE5 492 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 OR5T3Q8NGG3 340 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 UBE2E3Q969T4 207 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 FKBP10Q96AY3 582 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 MTFMTQ96DP5 389 aaKnown RBP15.19■□□□□ 0.02
USP39-205ENST00000442708 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 QRFPRQ96P65 431 aa15.19■□□□□ 0.02
USP39-205ENST00000442708 SLC26A1Q9H2B4 701 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms