RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 C1orf185Q5T7R7 199 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 MEI1Q5TIA1 1274 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 LINC00523Q86TU6 105 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 RELL2Q8NC24 303 aaPredicted RBP12.98□□□□□ -0.33
LINC00642-202ENST00000442515 KCT2Q8NC54 265 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 PSD4Q8NDX1 1056 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 NFAM1Q8NET5 270 aaPredicted RBP12.98□□□□□ -0.33
LINC00642-202ENST00000442515 ZNF480Q8WV37 535 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 TBC1D20Q96BZ9 403 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 FAM136AQ96C01 138 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 SH3GL2Q99962 352 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 TTTY12Q9BZ98 90 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 EFR3BQ9Y2G0 817 aa12.98□□□□□ -0.33
LINC00642-202ENST00000442515 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
LINC00642-202ENST00000442515 KCNE1BA0A087WTH5 132 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 TRBV11-1A0A0K0K1C0 115 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 ITGA10O75578 1167 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 ZNF189O75820 626 aaPredicted RBP12.97□□□□□ -0.33
LINC00642-202ENST00000442515 GAS8O95995 478 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 GDF10P55107 478 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
LINC00642-202ENST00000442515 RIPPLY2Q5TAB7 128 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 THEMIS2Q5TEJ8 643 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 TRILQ7L0X0 811 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 SLC22A16Q86VW1 577 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 LRRC6Q86X45 466 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 VWA5B2Q8N398 1253 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 CAMKVQ8NCB2 501 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 APCDD1LQ8NCL9 501 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 SIMC1Q8NDZ2 872 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 OR2M7Q8NG81 312 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 CCDC42Q96M95 316 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 CHP1Q99653 195 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 FAM114A2Q9NRY5 505 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 TCAF1Q9Y4C2 921 aa12.97□□□□□ -0.33
LINC00642-202ENST00000442515 ZNF407Q9C0G0 2248 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 A0A1B0GVC2 190 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 AQP7O14520 342 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 SMAD7O15105 426 aaKnown RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 CD3EAPO15446 510 aaKnown RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 PSMD3O43242 534 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 B4GALT2O60909 372 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 NIPSNAP2O75323 286 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 GLSO94925 669 aaPredicted RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 CATP04040 527 aaKnown RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 JAK1P23458 1154 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 ADRA1DP25100 572 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 PTPN7P35236 360 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 ASCL1P50553 236 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 HADHBP55084 474 aaKnown RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 OLR1P78380 273 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 QSOX2Q6ZRP7 698 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 ASPGQ86U10 573 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 CXorf67Q86X51 503 aaPredicted RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 TM4SF19Q96DZ7 209 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 THAP11Q96EK4 314 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 PTCHD1Q96NR3 888 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 NHEJ1Q9H9Q4 299 aaPredicted RBP12.96□□□□□ -0.33
LINC00642-202ENST00000442515 FBXW2Q9UKT8 454 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 ACAD8Q9UKU7 415 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 INTUQ9ULD6 942 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 ERVK-11Q9UQG0 969 aa12.96□□□□□ -0.33
LINC00642-202ENST00000442515 TUBAL3A6NHL2 446 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 CLCA1A8K7I4 914 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 G3V3Y1 287 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 DNAJB6O75190 326 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 NDUFS3O75489 264 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 EPXP11678 715 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 BMP5P22003 454 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 GRIA1P42261 906 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 MAGEA5P43359 124 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 SSR4P51571 173 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 CLCN2P51788 898 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 BTG2P78543 158 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 KCNJ11Q14654 390 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 KLHL38Q2WGJ6 581 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 FBXL19-AS1Q494R0 122 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 ACSBG2Q5FVE4 666 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 NDUFAF5Q5TEU4 345 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 AADACL2Q6P093 401 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 KIAA0408Q6ZU52 694 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 SLC26A11Q86WA9 606 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 SLC13A3Q8WWT9 602 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 PEX13Q92968 403 aa12.95□□□□□ -0.34
LINC00642-202ENST00000442515 BIRC8Q96P09 236 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms