RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF1O95521 474 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CSTF3Q12996 717 aaKnown RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 GAB1Q13480 694 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 INSL4Q14641 139 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 QPRTQ15274 297 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 UGT8Q16880 541 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CDONQ4KMG0 1287 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 IQCCQ4KMZ1 466 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 LRIF1Q5T3J3 769 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 OR8H3Q8N146 312 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 OR6C4Q8NGE1 309 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PHF21AQ96BD5 680 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 TADA1Q96BN2 335 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZIC5Q96T25 663 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CCDC32Q9BV29 185 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 MIXL1Q9H2W2 232 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PCDHGB2Q9Y5G2 931 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ANKRD66B4E2M5 251 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 INSIG1O15503 277 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 B4GALT3O60512 393 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 TPST2O60704 377 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SYPP08247 313 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 EPORP19235 508 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CD72P21854 359 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SLC6A4P31645 630 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CLDN8P56748 225 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PSPHP78330 225 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.88□□□□□ -0.354e-6■■□□□ 13.3
ACTN1-204ENST00000438964 DUSP28Q4G0W2 176 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 LRRC73Q5JTD7 316 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PLET1Q6UQ28 207 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 IQCF1Q8N6M8 205 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 AQP11Q8NBQ7 271 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 FAM129BQ96TA1 746 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PKP4Q99569 1192 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 TM9SF2Q99805 663 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 POLR2J2Q9GZM3 115 aaKnown RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 KATNBL1Q9H079 304 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ASB8Q9H765 288 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 DHRS7Q9Y394 339 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 GRIP1Q9Y3R0 1128 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 I3L521 148 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 STK16O75716 305 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 UGT2B17O75795 530 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF865P0CJ78 1059 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 IRF1P10914 325 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ATF4P18848 351 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 HSPA14Q0VDF9 509 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-204ENST00000438964 POU4F3Q15319 338 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 ZNF792Q3KQV3 632 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 FAAH2Q6GMR7 532 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 FLCNQ8NFG4 579 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 PIH1D2Q8WWB5 315 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SLC39A13Q96H72 371 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 NPAP1Q9NZP6 1156 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 SLC22A14Q9Y267 594 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
ACTN1-204ENST00000438964 WDR90Q96KV7 1748 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 RRN3P2A6NIE6 340 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 ARHGEF9O43307 516 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 PLOD3O60568 738 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 GCM2O75603 506 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-204ENST00000438964 CLDN9O95484 217 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 SDC2P34741 201 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 RORCP51449 518 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 SMSP52788 366 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 TAF10Q12962 218 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 HKDC1Q2TB90 917 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 PRAMEF9Q5VWM5 478 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 VWA5B2Q8N398 1253 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 OR4M2Q8NGB6 313 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 RIPOR3Q96MK2 946 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 DHRS9Q9BPW9 319 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 FAM83DQ9H4H8 585 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 UBA2Q9UBT2 640 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-204ENST00000438964 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 DOCK3Q8IZD9 2030 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 PTPRDP23468 1912 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 LEUTXA8MZ59 168 aa12.87□□□□□ -0.35
ACTN1-204ENST00000438964 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms