RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 DMRTB1Q96MA1 342 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 DNAJB9Q9UBS3 223 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 CDC14AQ9UNH5 594 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ST14Q9Y5Y6 855 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 IRAK3Q9Y616 596 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TNFRSF11BO00300 401 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 E2F3O00716 465 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 IMPDH2P12268 514 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRR5P85299 388 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 CTBSQ01459 385 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRKCQQ04759 706 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDKL4Q5MAI5 379 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 SVOPQ8N4V2 548 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 DEFB119Q8N690 84 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 WDR92Q96MX6 357 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 C17orf62Q9BQA9 187 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 ABCG4Q9H172 646 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 CYP8B1Q9UNU6 501 aa11.15□□□□□ -0.63
TRAPPC9-202ENST00000438773 NPC1O15118 1278 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 CREG1O75629 220 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 MATN4O95460 622 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 NOS3P29474 1203 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDC42P60953 191 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 TMEM151AQ8N4L1 468 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR5AR1Q8NGP9 310 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 TNFRSF12AQ9NP84 129 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 OLAHQ9NV23 265 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 IFT80Q9P2H3 777 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 PTBP2Q9UKA9 531 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SOBPA7XYQ1 873 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPX3P22352 226 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 CLDN8P56748 225 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 GPNMBQ14956 572 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 NEK5Q6P3R8 708 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 TMC8Q8IU68 726 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 JPH3Q8WXH2 748 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 APIPQ96GX9 242 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZNF419Q96HQ0 510 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 COX4I2Q96KJ9 171 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 GSDMCQ9BYG8 508 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 PCDHGA7Q9Y5G6 932 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SIP14410 1827 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 RHPN2P1A8MT19 583 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 EEDO75530 441 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 MED26O95402 600 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 NUDT14O95848 222 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 MTHFD2P13995 350 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 HSD3B1P14060 373 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 HSD3B2P26439 372 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 TIA1P31483 386 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 NCBP2P52298 156 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 CDH12P55289 794 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 TAB1Q15750 504 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SYT16Q17RD7 645 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 IFI44LQ53G44 452 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SBSNQ6UWP8 590 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 ERMP1Q7Z2K6 904 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 ZUFSPQ96AP4 578 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 ARRDC3Q96B67 414 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLCO4A1Q96BD0 722 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLC45A3Q96JT2 553 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 PBX4Q9BYU1 374 aa11.14□□□□□ -0.63
TRAPPC9-202ENST00000438773 NME4O00746 187 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 SOCS2O14508 198 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 UBFD1O14562 309 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 LAMTOR5O43504 91 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CBFA2T3O75081 653 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 C6orf47O95873 294 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ALDOCP09972 364 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 GNSP15586 552 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ALAS2P22557 587 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRKACGP22612 351 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 DNASE1L3Q13609 305 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 COL9A2Q14055 689 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PAGE3Q5JUK9 113 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRPF38BQ5VTL8 546 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ALG1LQ6GMV1 187 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 HMBOX1Q6NT76 420 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 FAR1Q8WVX9 515 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 NXPE3Q969Y0 559 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 SLC35G5Q96KT7 338 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 YIPF4Q9BSR8 244 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 KCNH6Q9H252 994 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 REEP4Q9H6H4 257 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 BTBD3Q9Y2F9 522 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PMF1-BGLAPU3KQ54 211 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CASP8AP2Q9UKL3 1982 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 RTCAO00442 366 aaKnown RBP11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 SNPHO15079 494 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 ADAMDEC1O15204 470 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 TBX1O43435 398 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 PRMT3O60678 531 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 TYRP1P17643 537 aa11.13□□□□□ -0.63
TRAPPC9-202ENST00000438773 CSNK2A2P19784 350 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms