RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TMEM205Q6UW68 189 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 PARP9Q8IXQ6 854 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 UTP15Q8TED0 518 aaKnown RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 UBTD2Q8WUN7 234 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 ISL2Q96A47 359 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 PTCD3Q96EY7 689 aaKnown RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 EFCAB11Q9BUY7 163 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 VN1R1Q9GZP7 353 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 VPS11Q9H270 941 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 CLK4Q9HAZ1 481 aaKnown RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF160Q9HCG1 818 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 RIC8BQ9NVN3 520 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 C19orf25Q9UFG5 118 aaPredicted RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 LOC102723996A0A087X1L8 192 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 COX6A1P12074 109 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 GLRBP48167 497 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 AP2B1P63010 937 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 LAPTM5Q13571 262 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 XKR6Q5GH73 641 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 AGAP7PQ5VUJ5 663 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 IGFL3Q6UXB1 125 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 CREB3L4Q8TEY5 395 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 WDR34Q96EX3 536 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 AGAP4Q96P64 663 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 OPTCQ9UBM4 332 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 SCN3AQ9NY46 2000 aa23.37■■□□□ 1.33
RAPGEF1-206ENST00000438647 IGHV1-45A0A0A0MS14 117 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 EXOC1LA0A1B0GW35 172 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF860A6NHJ4 632 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 ANKDD1BA6NHY2 528 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 K7EPI3 171 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 JRKO75564 520 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 HNF4AP41235 474 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 IRF8Q02556 426 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 EEF1A2Q05639 463 aaKnown RBP23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 TBCCQ15814 346 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 HIST2H2ACQ16777 129 aaPredicted RBP23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 NADK2Q4G0N4 442 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 LGSNQ5TDP6 509 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 HIST2H2AA3Q6FI13 130 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 KBTBD2Q8IY47 623 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 UHMK1Q8TAS1 419 aaKnown RBP23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 CCT6BQ92526 530 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 PEX11GQ96HA9 241 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 THOC3Q96J01 351 aaKnown RBP23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 MESP1Q9BRJ9 268 aa23.36■■□□□ 1.33
RAPGEF1-206ENST00000438647 SPENQ96T58 3664 aaKnown RBP23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 CLEC3AO75596 197 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 WISP1O95388 367 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 ICAM2P13598 275 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 MTHFD2P13995 350 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 GFAPP14136 432 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 JAK1P23458 1154 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 MAGEA12P43365 314 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 AGTR2P50052 363 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 RAB8AP61006 207 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 HYAL2Q12891 473 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 DOC2AQ14183 400 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 TOR1AIP1Q5JTV8 583 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 COLEC12Q5KU26 742 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 RBMXL3Q8N7X1 1067 aaKnown RBP23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 OR5T3Q8NGG3 340 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 UBE2E3Q969T4 207 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 GAL3ST3Q96A11 431 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 PNPLA2Q96AD5 504 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 TBC1D20Q96BZ9 403 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF700Q9H0M5 742 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 L2HGDHQ9H9P8 463 aa23.35■■□□□ 1.33
RAPGEF1-206ENST00000438647 A0A088AWK7 358 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 TTLL8A6PVC2 850 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 SMIM10L1P0DMW3 83 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 EPB42P16452 691 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF10P21506 573 aaPredicted RBP23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 CASP2P42575 452 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 CHIT1Q13231 466 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 TSNAXIP1Q2TAA8 658 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 JMJD6Q6NYC1 403 aaPredicted RBP23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 RIPOR1Q6ZS17 1223 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 CNPY4Q8N129 248 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZADH2Q8N4Q0 377 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 EIF1ADQ8N9N8 165 aaKnown RBP23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 DCAKDQ8WVC6 231 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 SMIM10Q96HG1 83 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 FAR2Q96K12 515 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 TUBB6Q9BUF5 446 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 SLAMF7Q9NQ25 335 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 ASB1Q9Y576 335 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 ANGPTL3Q9Y5C1 460 aa23.34■■□□□ 1.33
RAPGEF1-206ENST00000438647 LRIT2A6NDA9 550 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 RIPK2O43353 540 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 CHST10O43529 356 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 SERPINA7P05543 415 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 FHP07954 510 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 SNRPAP09012 282 aaKnown RBP23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 RBP1P09455 135 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 COL6A2P12110 1019 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 ALDH18A1P54886 795 aaKnown RBP23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 KCNC4Q03721 635 aa23.33■■□□□ 1.33
RAPGEF1-206ENST00000438647 Q0VFX4 171 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms