RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 PLEKHG6Q3KR16 790 aa16.62■□□□□ 0.25
PTPRF-209ENST00000438120 PRAMEF17Q5VTA0 474 aa16.62■□□□□ 0.25
PTPRF-209ENST00000438120 OR6N1Q8NGY5 312 aa16.62■□□□□ 0.25
PTPRF-209ENST00000438120 EPYCQ99645 322 aa16.62■□□□□ 0.25
PTPRF-209ENST00000438120 IFI30P13284 250 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 PRKCDQ05655 676 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CD180Q99467 661 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CLIC3O95833 236 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 OR8H3Q8N146 312 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 OR56A1Q8NGH5 318 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 THAP3Q8WTV1 239 aaPredicted RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 TMCO6Q96DC7 493 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 DCSTAMPQ9H295 470 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 SERTAD3Q9UJW9 196 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 SLC18A2Q05940 514 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CYBRD1Q53TN4 286 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 DPY19L3Q6ZPD9 716 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 TMCO2Q7Z6W1 182 aaPredicted RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 SLC15A3Q8IY34 581 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 AURKBQ96GD4 344 aaPredicted RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 OAZ2O95190 189 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 FHP07954 510 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CDH11P55287 796 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 KRTCAP2Q8N6L1 136 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 PCDHGB5Q9Y5G0 923 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CAPN14A8MX76 684 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 MUSKO15146 869 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 AKAP8O43823 692 aaKnown RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 ADH1BP00325 375 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 CSTBP04080 98 aaKnown RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 OR2B6P58173 313 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 NNATQ16517 81 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF542PQ5EBM4 170 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 WDR77Q9BQA1 342 aaPredicted RBP16.61■□□□□ 0.25
PTPRF-209ENST00000438120 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 ITPAQ9BY32 194 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 TMEM165Q9HC07 324 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF69Q9UC07 566 aa16.61■□□□□ 0.25
PTPRF-209ENST00000438120 H3BSA7 217 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PEX12O00623 359 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 ITGA5P08648 1049 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 GP1BBP13224 206 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SLC6A4P31645 630 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PON3Q15166 354 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 KLHDC10Q6PID8 442 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 GPAT4Q86UL3 456 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 NATD1Q8N6N6 113 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 CD320Q9NPF0 282 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SPHK2Q9NRA0 654 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 FAM120CQ9NX05 1096 aaKnown RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 COL1A1P02452 1464 aaPredicted RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 IL33O95760 270 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 MRPL3P09001 348 aaKnown RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 WSCD2Q2TBF2 565 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SPIN3Q5JUX0 258 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 GAL3ST3Q96A11 431 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 MND1Q9BWT6 205 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 CFL2Q9Y281 166 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 WDR45Q9Y484 360 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PTGDR2Q9Y5Y4 395 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PRSS51A0A1B0GVH4 220 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF670-ZNF695F2Z2N8 137 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 CDRT1O95170 752 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 MAGEA11P43364 429 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 EMX2Q04743 252 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PTTG2Q9NZH5 202 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 TMEM59LQ9UK28 342 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 DKKL1Q9UK85 242 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 HEXBP07686 556 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 ERN2Q76MJ5 926 aaKnown RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
PTPRF-209ENST00000438120 OR8K3Q8NH51 312 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 MAPK15Q8TD08 544 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 TRIB2Q92519 343 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 MAFFQ9ULX9 164 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 HCKP08631 526 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SLITRK4Q8IW52 837 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 OR10T2Q8NGX3 314 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 CEP76Q8TAP6 659 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 SHISA4Q96DD7 197 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 ACTR3BQ9P1U1 418 aa16.6■□□□□ 0.25
PTPRF-209ENST00000438120 WASHC1A8K0Z3 465 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TTC34A8MYJ7 566 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 WASH3PC4AMC7 463 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 CBLBQ13191 982 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 WASH2PQ6VEQ5 465 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TTLL10Q6ZVT0 673 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TOMM5Q8N4H5 51 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 IL17FQ96PD4 163 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 P2RY13Q9BPV8 354 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 ASPNQ9BXN1 380 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 OR51I1Q9H343 314 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 METTL8Q9H825 291 aaKnown RBP16.59■□□□□ 0.25
PTPRF-209ENST00000438120 TEX46H3BTG2 121 aa16.59■□□□□ 0.25
PTPRF-209ENST00000438120 ZNF41P51814 821 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms