RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ZNF888P0CJ79 500 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 MTHFD2P13995 350 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 GFAPP14136 432 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 PLA2G2AP14555 144 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 HPDP32754 393 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 AGTR2P50052 363 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 ALDH18A1P54886 795 aaKnown RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 STXBP1P61764 594 aaKnown RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 MAT1AQ00266 395 aaKnown RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 IRF8Q02556 426 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 DOC2AQ14183 400 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 HIST2H2ACQ16777 129 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 TECRLQ5HYJ1 363 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 PAGE2BQ5JRK9 111 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 HIST2H2AA3Q6FI13 130 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.38■□□□□ 0.053e-6■■■■■ 34.1
SMPD4-207ENST00000435455 TEX19Q8NA77 164 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 UTP15Q8TED0 518 aaKnown RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 CREB3L4Q8TEY5 395 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 MTBPQ96DY7 904 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 SMAD5Q99717 465 aaKnown RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 CCDC77Q9BR77 488 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 NUDT9Q9BW91 350 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 C5AR2Q9P296 337 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 BAHCC1Q9P281 2608 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 A0A1W2PQ72 361 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 ZNF500O60304 480 aaPredicted RBP15.37■□□□□ 0.05
SMPD4-207ENST00000435455 CLEC3AO75596 197 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 HPP00738 406 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 PDGFAP04085 211 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 EPB42P16452 691 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 TNFRSF8P28908 595 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 PCDH1Q08174 1060 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 HYAL2Q12891 473 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 CHIT1Q13231 466 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 SLC29A2Q14542 456 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 SETDB1Q15047 1291 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 PFKFB4Q16877 469 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 DEFB134Q4QY38 66 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 TOR1AIP1Q5JTV8 583 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 MFSD4BQ5TF39 518 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 IRAK1BP1Q5VVH5 260 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 METTL2BQ6P1Q9 378 aaKnown RBP15.37■□□□□ 0.05
SMPD4-207ENST00000435455 ADGRD1Q6QNK2 874 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 METTL21AQ8WXB1 218 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 UBE2E3Q969T4 207 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 GAL3ST3Q96A11 431 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 OR1F2PQ96R84 312 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 VN1R1Q9GZP7 353 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 FETUBQ9UGM5 382 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 TMCO1Q9UM00 188 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 ASB1Q9Y576 335 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 ANGPTL3Q9Y5C1 460 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 TNPO3Q9Y5L0 923 aaKnown RBP15.37■□□□□ 0.05
SMPD4-207ENST00000435455 MYO18BQ8IUG5 2567 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 CNTRLQ7Z7A1 2325 aa15.37■□□□□ 0.05
SMPD4-207ENST00000435455 NSG1A0A0A6YYJ2 146 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 ZNF860A6NHJ4 632 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 KLK8O60259 260 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 DPM1O60762 260 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 PRAMEF4O60810 478 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 ALOX12BO75342 701 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 JRKO75564 520 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 EPORP19235 508 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 ITGA3P26006 1051 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 CASRP41180 1078 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 HNF4AP41235 474 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 RAPSNQ13702 412 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 E2F2Q14209 437 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-207ENST00000435455 MINDY4Q4G0A6 757 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 PRAMEF9Q5VWM5 478 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 FAAH2Q6GMR7 532 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 TMEM205Q6UW68 189 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 TIFABQ6ZNK6 161 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 NDUFAF7Q7L592 441 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 GSPT2Q8IYD1 628 aaKnown RBP15.36■□□□□ 0.05
SMPD4-207ENST00000435455 PLD6Q8N2A8 252 aaKnown RBP15.36■□□□□ 0.05
SMPD4-207ENST00000435455 TEX9Q8N6V9 391 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 CCT6BQ92526 530 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 C8orf44Q96CB5 159 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 SCYL1Q96KG9 808 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 RHBGQ9H310 441 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 RIC8BQ9NVN3 520 aa15.36■□□□□ 0.05
SMPD4-207ENST00000435455 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
SMPD4-207ENST00000435455 C19orf25Q9UFG5 118 aaPredicted RBP15.36■□□□□ 0.05
SMPD4-207ENST00000435455 SCN2AQ99250 2005 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 LOC102723996A0A087X1L8 192 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 A0A088AWK7 358 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 IQANK1A0A1B0GTG1 560 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 J3QKU1 62 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 MASP2O00187 686 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 CHST10O43529 356 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 SMIM24O75264 130 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 C8orf89P0DMQ9 161 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 SMIM10L1P0DMW3 83 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 MYBL2P10244 700 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 COX6A1P12074 109 aa15.35■□□□□ 0.05
SMPD4-207ENST00000435455 RNH1P13489 461 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms