RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ITGB8P26012 769 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 RRM2P31350 389 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 CTNNB1P35222 781 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 GRK3P35626 688 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 BMPR1AP36894 532 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 CRATP43155 626 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 PXNP49023 591 aaPredicted RBP10.01□□□□□ -0.81
CD44-210ENST00000434472 PRIM2P49643 509 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 BMXP51813 675 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 C2orf80Q0P641 193 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 GAB1Q13480 694 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 SCARB2Q14108 478 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 STARD3Q14849 445 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 GRIN2CQ14957 1233 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 SPCS2Q15005 226 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 CYP2A13Q16696 494 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 DGUOKQ16854 277 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 LRRC26Q2I0M4 334 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 TMEM52BQ4KMG9 183 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.01□□□□□ -0.81
CD44-210ENST00000434472 FAM71E1Q6IPT2 247 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 LCTLQ6UWM7 567 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 TRMT11Q7Z4G4 463 aaKnown RBP10.01□□□□□ -0.81
CD44-210ENST00000434472 TRAPPC5Q8IUR0 188 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 NAGSQ8N159 534 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 KRT78Q8N1N4 520 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 LILRA3Q8N6C8 439 aaPredicted RBP10.01□□□□□ -0.81
CD44-210ENST00000434472 SPPL2AQ8TCT8 520 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 C16orf78Q8WTQ4 265 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 MYLIPQ8WY64 445 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 HRASLS5Q96KN8 279 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 SLC35A5Q9BS91 424 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 WRAP53Q9BUR4 548 aaKnown RBP10.01□□□□□ -0.81
CD44-210ENST00000434472 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
CD44-210ENST00000434472 OR2AG1Q9H205 316 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 HMG20AQ9NP66 347 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 THSD1Q9NS62 852 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 PLCXD1Q9NUJ7 323 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 ENOPH1Q9UHY7 261 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 ERVK-11Q9UQG0 969 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 POFUT2Q9Y2G5 429 aa10.01□□□□□ -0.81
CD44-210ENST00000434472 M0R3G1 203 aa10□□□□□ -0.81
CD44-210ENST00000434472 LZTS3O60299 673 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 FOXD2O60548 495 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 DIRAS1O95057 198 aa10□□□□□ -0.81
CD44-210ENST00000434472 MT-ND2P03891 347 aa10□□□□□ -0.81
CD44-210ENST00000434472 NTRK1P04629 796 aa10□□□□□ -0.81
CD44-210ENST00000434472 NUDT7P0C024 238 aa10□□□□□ -0.81
CD44-210ENST00000434472 KELP23276 732 aa10□□□□□ -0.81
CD44-210ENST00000434472 ACVR2AP27037 513 aa10□□□□□ -0.81
CD44-210ENST00000434472 SERPINB1P30740 379 aa10□□□□□ -0.81
CD44-210ENST00000434472 GGT2P36268 569 aa10□□□□□ -0.81
CD44-210ENST00000434472 HSD17B2P37059 387 aa10□□□□□ -0.81
CD44-210ENST00000434472 RPA4Q13156 261 aa10□□□□□ -0.81
CD44-210ENST00000434472 CAMK2GQ13555 558 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 LAPTM4AQ15012 233 aa10□□□□□ -0.81
CD44-210ENST00000434472 SF1Q15637 639 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 CTF1Q16619 201 aa10□□□□□ -0.81
CD44-210ENST00000434472 FNDC3BQ53EP0 1204 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 ZNF385BQ569K4 471 aa10□□□□□ -0.81
CD44-210ENST00000434472 CATSPEREQ5SY80 951 aa10□□□□□ -0.81
CD44-210ENST00000434472 MLIPQ5VWP3 458 aa10□□□□□ -0.81
CD44-210ENST00000434472 RAET1GQ6H3X3 334 aa10□□□□□ -0.81
CD44-210ENST00000434472 GALNT10Q86SR1 603 aa10□□□□□ -0.81
CD44-210ENST00000434472 P2RY8Q86VZ1 359 aa10□□□□□ -0.81
CD44-210ENST00000434472 P3H2Q8IVL5 708 aa10□□□□□ -0.81
CD44-210ENST00000434472 LRRC56Q8IYG6 542 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
CD44-210ENST00000434472 ABHD11Q8NFV4 315 aa10□□□□□ -0.81
CD44-210ENST00000434472 VN1R2Q8NFZ6 395 aa10□□□□□ -0.81
CD44-210ENST00000434472 OR2L2Q8NH16 312 aa10□□□□□ -0.81
CD44-210ENST00000434472 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
CD44-210ENST00000434472 POF1BQ8WVV4 589 aa10□□□□□ -0.81
CD44-210ENST00000434472 MYDGFQ969H8 173 aa10□□□□□ -0.81
CD44-210ENST00000434472 RAD51AP1Q96B01 352 aa10□□□□□ -0.81
CD44-210ENST00000434472 ARRDC3Q96B67 414 aa10□□□□□ -0.81
CD44-210ENST00000434472 VMP1Q96GC9 406 aa10□□□□□ -0.81
CD44-210ENST00000434472 RAD9AQ99638 391 aa10□□□□□ -0.81
CD44-210ENST00000434472 MTG2Q9H4K7 406 aa10□□□□□ -0.81
CD44-210ENST00000434472 PELI2Q9HAT8 420 aa10□□□□□ -0.81
CD44-210ENST00000434472 ANKHQ9HCJ1 492 aa10□□□□□ -0.81
CD44-210ENST00000434472 TAS2R9Q9NYW1 312 aa10□□□□□ -0.81
CD44-210ENST00000434472 SPASTQ9UBP0 616 aa10□□□□□ -0.81
CD44-210ENST00000434472 EXO1Q9UQ84 846 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 ANGPT4Q9Y264 503 aa10□□□□□ -0.81
CD44-210ENST00000434472 ITM2BQ9Y287 266 aa10□□□□□ -0.81
CD44-210ENST00000434472 RWDD3Q9Y3V2 267 aa10□□□□□ -0.81
CD44-210ENST00000434472 MTCL1Q9Y4B5 1905 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 A0A1W2PRB8 838 aa10□□□□□ -0.81
CD44-210ENST00000434472 CLDN25C9JDP6 229 aa10□□□□□ -0.81
CD44-210ENST00000434472 TBX19O60806 448 aa10□□□□□ -0.81
CD44-210ENST00000434472 SH3BGRLO75368 114 aa10□□□□□ -0.81
CD44-210ENST00000434472 POP7O75817 140 aaKnown RBP10□□□□□ -0.81
CD44-210ENST00000434472 PAPLNO95428 1278 aa10□□□□□ -0.81
CD44-210ENST00000434472 C6orf47O95873 294 aa10□□□□□ -0.81
CD44-210ENST00000434472 SOD1P00441 154 aa10□□□□□ -0.81
CD44-210ENST00000434472 C1QCP02747 245 aa10□□□□□ -0.81
CD44-210ENST00000434472 RPN2P04844 631 aa10□□□□□ -0.81
CD44-210ENST00000434472 CEBPBP17676 345 aa10□□□□□ -0.81
CD44-210ENST00000434472 UQCRC2P22695 453 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms