RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 SCN2AQ99250 2005 aa13.97□□□□□ -0.17
PRKDC-203ENST00000432581 MTORP42345 2549 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 PABPN1LA6NDY0 278 aaKnown RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 GALR3O60755 368 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 NPPBP16860 134 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ALOX12P18054 663 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 TPP2P29144 1249 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 MAGEA3P43357 314 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 DHX9Q08211 1270 aaKnown RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 KCTD19Q17RG1 926 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 MBOAT1Q6ZNC8 495 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 QSOX2Q6ZRP7 698 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ZNF662Q6ZS27 426 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ABHD13Q7L211 337 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 STRA8Q7Z7C7 330 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 CHERPQ8IWX8 916 aaKnown RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ACBD4Q8NC06 268 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ZNF740Q8NDX6 193 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 TRIM58Q8NG06 486 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 GABPB2Q8TAK5 448 aaPredicted RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 CA5BP1Q8WTZ4 195 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 DMRTA2Q96SC8 542 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ENKD1Q9H0I2 346 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 CLK4Q9HAZ1 481 aaKnown RBP13.96□□□□□ -0.17
PRKDC-203ENST00000432581 MCCC2Q9HCC0 563 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 COQ3Q9NZJ6 369 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 ASB1Q9Y576 335 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 MAD1L1Q9Y6D9 718 aa13.96□□□□□ -0.17
PRKDC-203ENST00000432581 SETD2Q9BYW2 2564 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 AKAP9Q99996 3911 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 CELSR1Q9NYQ6 3014 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 TRBC2A0A5B9 178 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 SAGE2PA6NJ88 616 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 FCHO1O14526 889 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 ADAM10O14672 748 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 FANCGO15287 622 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 CHST10O43529 356 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 OR1F1O43749 312 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 PRMT3O60678 531 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 TRHRP34981 398 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 HLCSP50747 726 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 MLF1P58340 268 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 HSF1Q00613 529 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 TLE4Q04727 773 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 RGS1Q08116 209 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 DEFB134Q4QY38 66 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 HSP90AA5PQ58FG0 334 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 ZNF468Q5VIY5 522 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 DUPD1Q68J44 220 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 NCCRP1Q6ZVX7 275 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 CDH24Q86UP0 819 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 CYP4X1Q8N118 509 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 KIF2BQ8N4N8 673 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 C2CD4AQ8NCU7 369 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 OR4K1Q8NGD4 311 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 NT5CQ8TCD5 201 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 SDCCAG3Q96C92 435 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 PTCHD1Q96NR3 888 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 LZTFL1Q9NQ48 299 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 IARS2Q9NSE4 1012 aaKnown RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 PPT2Q9UMR5 302 aa13.95□□□□□ -0.18
PRKDC-203ENST00000432581 KLF13Q9Y2Y9 288 aaPredicted RBP13.95□□□□□ -0.18
PRKDC-203ENST00000432581 URADA6NGE7 173 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 B4GALT2O60909 372 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 SERPIND1P05546 499 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 CXCR5P32302 372 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 AP1S2P56377 157 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 TIAL1Q01085 375 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKDC-203ENST00000432581 TESK1Q15569 626 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 RNFT1Q5M7Z0 435 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 SPNS3Q6ZMD2 512 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 MEX3BQ6ZN04 569 aaKnown RBP13.94□□□□□ -0.18
PRKDC-203ENST00000432581 FGD2Q7Z6J4 655 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ARMC10Q8N2F6 343 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ARMC2Q8NEN0 867 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 OR56A3Q8NH54 315 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ATL1Q8WXF7 558 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 LINGO1Q96FE5 620 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 SNF8Q96H20 258 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 SIGLEC10Q96LC7 697 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 NDNQ99608 321 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 TREX2Q9BQ50 279 aaPredicted RBP13.94□□□□□ -0.18
PRKDC-203ENST00000432581 TRIM54Q9BYV2 358 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 DEFB126Q9BYW3 111 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ARL15Q9NXU5 204 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ZFP69BQ9UJL9 534 aa13.94□□□□□ -0.18
PRKDC-203ENST00000432581 ZFHX3Q15911 3703 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 CACNA1CQ13936 2221 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 KLRC4-KLRK1H3BQV0 150 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-203ENST00000432581 TFECO14948 347 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-203ENST00000432581 ZNHIT1O43257 154 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 CCDC175P0C221 793 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 ZNF888P0CJ79 500 aaPredicted RBP13.93□□□□□ -0.18
PRKDC-203ENST00000432581 PTGS2P35354 604 aa13.93□□□□□ -0.18
PRKDC-203ENST00000432581 AHRP35869 848 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms