RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SNRPNP63162 240 aaKnown RBP13.83□□□□□ -0.2
SGCE-204ENST00000428696 PHEXP78562 749 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 MAT1AQ00266 395 aaKnown RBP13.83□□□□□ -0.2
SGCE-204ENST00000428696 OCA2Q04671 838 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 ASPHQ12797 758 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 IFT88Q13099 833 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 SYT16Q17RD7 645 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 LIPMQ5VYY2 423 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 CDYL2Q8N8U2 506 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 HUS1BQ8NHY5 278 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 CREB3L4Q8TEY5 395 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 L3HYPDHQ96EM0 354 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 WDR34Q96EX3 536 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 PITHD1Q9GZP4 211 aaPredicted RBP13.83□□□□□ -0.2
SGCE-204ENST00000428696 RHBGQ9H310 441 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 ELOVL6Q9H5J4 265 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 MID1IP1Q9NPA3 183 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 HCN3Q9P1Z3 774 aa13.83□□□□□ -0.2
SGCE-204ENST00000428696 PTRH2Q9Y3E5 179 aaKnown RBP13.83□□□□□ -0.2
SGCE-204ENST00000428696 LRIT2A6NDA9 550 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 C21orf140B9A014 251 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 NKX2-8O15522 239 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 EFSO43281 561 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 ERI3O43414 337 aaKnown RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 FOXS1O43638 330 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 CLEC3AO75596 197 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 KLHL18O94889 574 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 ALOX12P18054 663 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 WT1P19544 449 aaPredicted RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 HMOX2P30519 316 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 CCR10P46092 362 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 EMP3P54852 163 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 DNAJB13P59910 316 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 OLR1P78380 273 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 FAM53BQ14153 422 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 PCLAFQ15004 111 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 HERC3Q15034 1050 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 NCF4Q15080 339 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 HHATQ5VTY9 493 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 CHSY3Q70JA7 882 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 OVCH1Q7RTY7 1134 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 NUDCD3Q8IVD9 361 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 METTL6Q8TCB7 284 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 UTP15Q8TED0 518 aaKnown RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 STARD8Q92502 1023 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 ARL8AQ96BM9 186 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 PKNOX2Q96KN3 472 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 NTMT1Q9BV86 223 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 SARGQ9BW04 601 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 GPR87Q9BY21 358 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 REXO4Q9GZR2 422 aaKnown RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 OR51B5Q9H339 312 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 SOX17Q9H6I2 414 aaPredicted RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 SLC22A11Q9NSA0 550 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 PADI2Q9Y2J8 665 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 ANKRD11Q6UB99 2663 aaPredicted RBP13.82□□□□□ -0.2
SGCE-204ENST00000428696 HEATR5BQ9P2D3 2071 aa13.82□□□□□ -0.2
SGCE-204ENST00000428696 A0A1B0GTL3 188 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 AGPSO00116 658 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 UGDHO60701 494 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 RDH16O75452 317 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ITGAXP20702 1163 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 OTX2P32243 289 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 HPDP32754 393 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 FOLR3P41439 243 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 RAP1GDS1P52306 607 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 UCNP55089 124 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 TGM3Q08188 693 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 VAC14Q08AM6 782 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 LCP2Q13094 533 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 TRAF3Q13114 568 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 VWA2Q5GFL6 755 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ATP1A1-AS1Q5TC04 95 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 FAM219BQ5XKK7 198 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 LETMD1Q6P1Q0 360 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 TRIM40Q6P9F5 258 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZCCHC23Q6ZST2 131 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 VN1R5Q7Z5H4 357 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 LAS2Q8IYD9 372 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CMTM7Q96FZ5 175 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 C1QTNF3Q9BXJ4 246 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 RBCK1Q9BYM8 510 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 SLC6A16Q9GZN6 736 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 GSTO2Q9H4Y5 243 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 NKIRAS1Q9NYS0 192 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CTSFQ9UBX1 484 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZNF282Q9UDV7 671 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 SNX6Q9UNH7 406 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 FIS1Q9Y3D6 152 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 TIMM22Q9Y584 194 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 SLC22A7Q9Y694 548 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 CDC14CA4D256 554 aa13.81□□□□□ -0.2
SGCE-204ENST00000428696 ZNF891A8MT65 544 aaPredicted RBP13.81□□□□□ -0.2
SGCE-204ENST00000428696 MAGEB17A8MXT2 336 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms