RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CXCL9Q07325 125 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ITGA9Q13797 1035 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HNRNPDQ14103 355 aaKnown RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HERC3Q15034 1050 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 UGP2Q16851 508 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PLK5Q496M5 336 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ANKRD20A4Q4UJ75 823 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 FASTKD1Q53R41 847 aaKnown RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF766Q5HY98 468 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 N4BP2L1Q5TBK1 243 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 GRTP1Q5TC63 336 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 METTL21CQ5VZV1 264 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ARHGAP17Q68EM7 881 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 JADE1Q6IE81 842 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 LRRC8BQ6P9F7 803 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PACS1Q6VY07 963 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PXKQ7Z7A4 578 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 WDTC1Q8N5D0 677 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CLEC18CQ8NCF0 446 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ICA1LQ8NDH6 482 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SETD9Q8NE22 299 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 BEST2Q8NFU1 509 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 DTX3LQ8TDB6 740 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HTR3CQ8WXA8 447 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 LZICQ8WZA0 190 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CERS2Q96G23 380 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HPDLQ96IR7 371 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ADAD1Q96M93 576 aaKnown RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PANX3Q96QZ0 392 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PEBP4Q96S96 227 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CD180Q99467 661 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 THTPAQ9BU02 230 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 TRIM62Q9BVG3 475 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 NPLQ9BXD5 320 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ITPAQ9BY32 194 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 MRPS26Q9BYN8 205 aaKnown RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 KLHL4Q9C0H6 718 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ELOVL4Q9GZR5 314 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 MROH8Q9H579 483 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 TASP1Q9H6P5 420 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 LRRC40Q9H9A6 602 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 BRF2Q9HAW0 419 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 S100A14Q9HCY8 104 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SIRT3Q9NTG7 399 aaPredicted RBP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PTTG2Q9NZH5 202 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HCN3Q9P1Z3 774 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 ARMCX1Q9P291 453 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 TBC1D14Q9P2M4 693 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 COPG2Q9UBF2 871 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 SLC7A8Q9UHI5 535 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HACL1Q9UJ83 578 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 CDH22Q9UJ99 828 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 RIPK3Q9Y572 518 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 HEY1Q9Y5J3 304 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 PIAS3Q9Y6X2 628 aa4.88□□□□□ -1.63
LINC00458-202ENST00000427299 DOCK4Q8N1I0 1966 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 C15orf38-AP3S2A0A0A6YYH1 394 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ARHGAP10A1A4S6 786 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ASB14A6NK59 587 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 MEI4A8MW99 385 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 AP3D1O14617 1153 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SYN3O14994 580 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PSMD3O43242 534 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 STRNO43815 780 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PLIN3O60664 434 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TADA2AO75478 443 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TMCC1O94876 653 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 HSPA4LO95757 839 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 BAG2O95816 211 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 C1QAP02745 245 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 STAG3L1P0CL83 205 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 RALBP11234 206 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 LAMP2P13473 410 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 UQCRBP14927 111 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 GSTM2P28161 218 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 HSPA1LP34931 641 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PPARGP37231 505 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 MAGEA12P43365 314 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 HARS2P49590 506 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 NDST1P52848 882 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ABCE1P61221 599 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 GAD2Q05329 585 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PCLAFQ15004 111 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 C15orf59Q2T9L4 293 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 LIN52Q52LA3 116 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 PPP6R3Q5H9R7 873 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CELF3Q5SZQ8 465 aaKnown RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 FAM69AQ5T7M9 428 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 OR52E8Q6IFG1 317 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 SCYL2Q6P3W7 929 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 DENND5BQ6ZUT9 1274 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 CYP4V2Q6ZWL3 525 aaPredicted RBP4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF534Q76KX8 674 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ARMCX2Q7L311 632 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 ARPINQ7Z6K5 226 aa4.87□□□□□ -1.63
LINC00458-202ENST00000427299 TMPRSS12Q86WS5 348 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms