RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GRHL3Q8TE85 626 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 GATAD2BQ8WXI9 593 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 FN3KQ9H479 309 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CENPMQ9NSP4 180 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 KLRF1Q9NZS2 232 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SLC7A8Q9UHI5 535 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 RCCD1A6NED2 376 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 NDUFS4O43181 175 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 RBBP9O75884 186 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 GTF2F2P13984 249 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PPIGQ13427 754 aaKnown RBP eCLIP14□□□□□ -0.17
PTPN13-203ENST00000427191 BTBD16Q32M84 506 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 TMEM69Q5SWH9 247 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 TPGS2Q68CL5 300 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 NAT16Q8N8M0 369 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SALL3Q9BXA9 1300 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CD3GP09693 182 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PTPN2P17706 415 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 FRKP42685 505 aaPredicted RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 CTC1Q2NKJ3 1217 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 UGT2A3Q6UWM9 527 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CEACAM20Q6UY09 585 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 LRRTM4Q86VH4 590 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CARM1Q86X55 608 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 C22orf15Q8WYQ4 148 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 LDHAL6BQ9BYZ2 381 aaPredicted RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 NT5C1B-RDH14C9J2C7 533 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 CCND3P30281 292 aaPredicted RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF84P51523 738 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 RPP30P78346 268 aaKnown RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 ACSBG2Q5FVE4 666 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF767PQ75MW2 155 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SMPDL3AQ92484 453 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 LPPQ93052 612 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ERLEC1Q96DZ1 483 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ALPK1Q96QP1 1244 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ACP6Q9NPH0 428 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 PAK1IP1Q9NWT1 392 aaPredicted RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 RHDQ02161 417 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SLBPQ14493 270 aaKnown RBP eCLIP14□□□□□ -0.17
PTPN13-203ENST00000427191 DACT2Q5SW24 774 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 SNX29P2Q8IUI4 249 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 OR8J3Q8NGG0 315 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 KREMEN1Q96MU8 473 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ADGRB2O60241 1585 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 KLHL33A6NCF5 533 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 J3QLW9 94 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF19P17023 458 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 RPS3P23396 243 aaKnown RBP eCLIP14□□□□□ -0.17
PTPN13-203ENST00000427191 CLRN1P58418 232 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 ANKRD22Q5VYY1 191 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 COL20A1Q9P218 1284 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 IL36AQ9UHA7 158 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 HES2Q9Y543 173 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PCDHGA8Q9Y5G5 932 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 HHLA1C9JL84 531 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PIGGQ5H8A4 983 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PDZD9Q8IXQ8 264 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 THEM6Q8WUY1 208 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 MAELQ96JY0 434 aaKnown RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 DERL2Q9GZP9 239 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 PNO1Q9NRX1 252 aaKnown RBP14□□□□□ -0.17
PTPN13-203ENST00000427191 SRRDQ9UH36 339 aa14□□□□□ -0.17
PTPN13-203ENST00000427191 MLC1Q15049 377 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 BBS10Q8TAM1 723 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 TRIB3Q96RU7 358 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PRODH2Q9UF12 536 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PRKAB1Q9Y478 270 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 SMIM28A0A1B0GU29 152 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 TNFP01375 233 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 DNAJB13P59910 316 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 JOSD2Q8TAC2 188 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF649Q9BS31 505 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 DNM1LO00429 736 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF182P17025 639 aaPredicted RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PFKLP17858 780 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 GPR68Q15743 365 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ABHD15Q6UXT9 468 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 IL4I1Q96RQ9 567 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 INMT-MINDY4F8WBC2 141 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PEX12O00623 359 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 MAGEA6P43360 314 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 LASP1Q14847 261 aaKnown RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PELOQ9BRX2 385 aaKnown RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 FAM86C1Q9NVL1 165 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 TGFB1I1O43294 461 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 NPAS4Q8IUM7 802 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 SNX27Q96L92 541 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 MROQ9BYG7 248 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF705EA8MWA4 302 aaPredicted RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 F5H0A9 414 aaPredicted RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 FAAHO00519 579 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 PLGLB1Q02325 96 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 EMX2Q04743 252 aa13.99□□□□□ -0.17
PTPN13-203ENST00000427191 ZNF267Q14586 743 aaPredicted RBP13.99□□□□□ -0.17
PTPN13-203ENST00000427191 HSH2DQ96JZ2 352 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms