RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 SLC16A8O95907 504 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 RPS3P23396 243 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 HRH2P25021 359 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PTPN7P35236 360 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 CETN2P41208 172 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 NR0B1P51843 470 aaKnown RBP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 HADHBP55084 474 aaKnown RBP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 EIF3BP55884 814 aaKnown RBP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 IQCB1Q15051 598 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 C1orf185Q5T7R7 199 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 RIPPLY2Q5TAB7 128 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PPP1R21Q6ZMI0 780 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PDSS2Q86YH6 399 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 MPP5Q8N3R9 675 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PSD4Q8NDX1 1056 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PEX13Q92968 403 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 PKP4Q99569 1192 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 MARCH4Q9P2E8 410 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
HDAC6-206ENST00000426196 SONP18583 2426 aaKnown RBP13.22□□□□□ -0.29
HDAC6-206ENST00000426196 TRBV11-1A0A0K0K1C0 115 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 FEZF1A0PJY2 475 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 ERI2A8K979 691 aaKnown RBP13.21□□□□□ -0.29
HDAC6-206ENST00000426196 E7ENX8 843 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 ITGA10O75578 1167 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 TACR1P25103 407 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 ASCL1P50553 236 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 SKP1P63208 163 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 TAP2Q03519 686 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 GBX1Q14549 363 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 HERC3Q15034 1050 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 TYSND1Q2T9J0 566 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 WLSQ5T9L3 541 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 C11orf63Q6NUN7 778 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 KCT2Q8NC54 265 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 SIMC1Q8NDZ2 872 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 ZNF480Q8WV37 535 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 SLCO2A1Q92959 643 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
HDAC6-206ENST00000426196 PTCHD1Q96NR3 888 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 FAM129AQ9BZQ8 928 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-206ENST00000426196 DEPPQ9NTK1 212 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 TMEM184CQ9NVA4 438 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 KCMF1Q9P0J7 381 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 FBXW2Q9UKT8 454 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 TCAF1Q9Y4C2 921 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 SLC22A7Q9Y694 548 aa13.21□□□□□ -0.29
HDAC6-206ENST00000426196 CHD3Q12873 2000 aaKnown RBP13.21□□□□□ -0.29
HDAC6-206ENST00000426196 A8MVJ9 347 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 AQP7O14520 342 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SLC16A5O15375 505 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 B4GALT2O60909 372 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
HDAC6-206ENST00000426196 IGHG3P01860 377 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 C8BP07358 591 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SLC35G6P0C7Q6 338 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 GABRA1P14867 456 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SSR4P51571 173 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 CLCN2P51788 898 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 TRIM14Q14142 442 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 CTSL3PQ5NE16 218 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 Q5PR19 223 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 NDUFAF5Q5TEU4 345 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 GK5Q6ZS86 529 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 KIAA0408Q6ZU52 694 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 TRILQ7L0X0 811 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 ASPGQ86U10 573 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
HDAC6-206ENST00000426196 OR2M7Q8NG81 312 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 SARAFQ96BY9 339 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 FAM136AQ96C01 138 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 CHP1Q99653 195 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 TTTY12Q9BZ98 90 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 PLEKHF2Q9H8W4 249 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 HPF1Q9NWY4 346 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 ALKBH4Q9NXW9 302 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 FOXD3Q9UJU5 478 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-206ENST00000426196 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
HDAC6-206ENST00000426196 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 PINLYPA6NC86 204 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 TUBAL3A6NHL2 446 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 HSPB2A8KAH6 182 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 INAFM1C9JVW0 142 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 H3BMM5 538 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 H7C1Q1 480 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 DVL2O14641 736 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 NIPSNAP2O75323 286 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 GOSR1O95249 250 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 MBD3O95983 291 aa13.19□□□□□ -0.3
HDAC6-206ENST00000426196 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
HDAC6-206ENST00000426196 TPM3P06753 285 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms