RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 ABHD2P08910 425 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 ZNF888P0CJ79 500 aaPredicted RBP16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 CD22P20273 847 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 CASP2P42575 452 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 AGTR2P50052 363 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 SERPINB9P50453 376 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 DOC2AQ14183 400 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 PDK4Q16654 411 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 FAM83EQ2M2I3 478 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 DEFB134Q4QY38 66 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 LRRC70Q7Z2Q7 622 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 VN1R5Q7Z5H4 357 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 OR5T3Q8NGG3 340 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 UHMK1Q8TAS1 419 aaKnown RBP16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 SEC16BQ96JE7 1060 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 ZNF700Q9H0M5 742 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 ZBTB20Q9HC78 741 aaPredicted RBP16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 LANCL2Q9NS86 450 aa16.91■□□□□ 0.3
IGHV3-47-201ENST00000425060 OR2W5A6NFC9 320 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 SUPT3HB4E1H0 165 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 POC1B-GALNT4F8VUJ3 575 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 CLGNO14967 610 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 CCNT2O60583 730 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 SUPT3HO75486 399 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 WFS1O76024 890 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 SORBS2O94875 1100 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 WISP1O95388 367 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 S100BP04271 92 aaPredicted RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 FAM153BP0C7A2 387 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 IL10P22301 178 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 ITGA3P26006 1051 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 GSTM2P28161 218 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 GCAP28676 217 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 MSH2P43246 934 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 GLRBP48167 497 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 CD97P48960 835 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 EEF1A2Q05639 463 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 PCOLCEQ15113 449 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 TBCCQ15814 346 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 FAM153CQ494X1 144 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 FAAH2Q6GMR7 532 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 NIPAL1Q6NVV3 410 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 JMJD6Q6NYC1 403 aaPredicted RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 IGFL2Q6UWQ7 119 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 TRMT10CQ7L0Y3 403 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 ABHD13Q7L211 337 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 KRT78Q8N1N4 520 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 SNX31Q8N9S9 440 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 Q8NA96 180 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 PLPP5Q8NEB5 264 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 TTLQ8NG68 377 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 PTCD3Q96EY7 689 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 OR1F2PQ96R84 312 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 LHPPQ9H008 270 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 CLK4Q9HAZ1 481 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 ZNF160Q9HCG1 818 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 ZNF358Q9NW07 568 aa16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 SPENQ96T58 3664 aaKnown RBP16.9■□□□□ 0.3
IGHV3-47-201ENST00000425060 LRIT2A6NDA9 550 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 URADA6NGE7 173 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 RIPK2O43353 540 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 CHST10O43529 356 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 CLEC3AO75596 197 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 KRT38O76015 456 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 C8orf89P0DMQ9 161 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 CNTFP26441 200 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 HNF4AP41235 474 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 RAB8AP61006 207 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 RHAGQ02094 409 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 CHIT1Q13231 466 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 ADPRMQ3LIE5 342 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 XKR6Q5GH73 641 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 AMER2Q8N7J2 671 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 PSMF1Q92530 271 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 PEX11GQ96HA9 241 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 THOC3Q96J01 351 aaKnown RBP16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 IMMP1LQ96LU5 166 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 EFCAB11Q9BUY7 163 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 VPS11Q9H270 941 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 RHBGQ9H310 441 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 EPB41L4BQ9H329 900 aa16.89■□□□□ 0.29
IGHV3-47-201ENST00000425060 NSG1A0A0A6YYJ2 146 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 K7EPI3 171 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 ALPPP05187 535 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 HNRNPH1P31943 449 aaKnown RBP16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 MLLT10P55197 1068 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 SKP1P63208 163 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 OLR1P78380 273 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 FOXK1P85037 733 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 NAA30Q147X3 362 aaPredicted RBP16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 SETDB1Q15047 1291 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 MINDY4Q4G0A6 757 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 TECRLQ5HYJ1 363 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 TOR1AIP1Q5JTV8 583 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 SLC6A19Q695T7 634 aa16.88■□□□□ 0.29
IGHV3-47-201ENST00000425060 ADNP2Q6IQ32 1131 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms