RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 YIPF2Q9BWQ6 316 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 VN1R1Q9GZP7 353 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 DRC3Q9H069 523 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 RNF32Q9H0A6 362 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 CDC42EP4Q9H3Q1 356 aaKnown RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 NINJ2Q9NZG7 142 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 TRAV17A0A0B4J275 112 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 IGHV3-20A0A0C4DH32 117 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 FEZF1A0PJY2 475 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 ANXA5P08758 320 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 ENO2P09104 434 aaPredicted RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 CCND1P24385 295 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 GRNP28799 593 aaKnown RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 AP1S2P56377 157 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 CSNK1G2P78368 415 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 MEF2AQ02078 507 aaPredicted RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 GTF3C1Q12789 2109 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 CSHL1Q14406 222 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 UBAP2Q5T6F2 1119 aaKnown RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 CMC1Q7Z7K0 106 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 PDSS2Q86YH6 399 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 SLC34A3Q8N130 599 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 ITLN2Q8WWU7 325 aaPredicted RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 ATL1Q8WXF7 558 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 PDLIM5Q96HC4 596 aaKnown RBP12.24□□□□□ -0.45
VRK3-203ENST00000424804 TSNARE1Q96NA8 513 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 GPR22Q99680 433 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 PCBD2Q9H0N5 130 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 POPDC3Q9HBV1 291 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 PRM3Q9NNZ6 103 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 TMEM184CQ9NVA4 438 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 RIC8BQ9NVN3 520 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 ABI3Q9P2A4 366 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 MKL2Q9ULH7 1088 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 NFU1Q9UMS0 254 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 ENTPD4Q9Y227 616 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 DYRK1BQ9Y463 629 aa12.24□□□□□ -0.45
VRK3-203ENST00000424804 A0A1B0GUH1 482 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 DYTNA2CJ06 578 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 H0YIG0 161 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 TXNDC9O14530 226 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 PRPF4O43172 522 aaKnown RBP eCLIP12.23□□□□□ -0.45
VRK3-203ENST00000424804 MAN1A2O60476 641 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 DNAJB6O75190 326 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 NSA2O95478 260 aaKnown RBP12.23□□□□□ -0.45
VRK3-203ENST00000424804 C1QAP02745 245 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 SERPIND1P05546 499 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 CXCR2P25025 360 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 GRK3P35626 688 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 RAB10P61026 200 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 ILF2Q12905 390 aaKnown RBP12.23□□□□□ -0.45
VRK3-203ENST00000424804 NAB1Q13506 487 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 INAQ16352 499 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 FBXO48Q5FWF7 155 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 MROH9Q5TGP6 573 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 TMEM214Q6NUQ4 689 aaKnown RBP12.23□□□□□ -0.45
VRK3-203ENST00000424804 LCTLQ6UWM7 567 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 CYS1Q717R9 158 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 TBC1D1Q86TI0 1168 aaPredicted RBP12.23□□□□□ -0.45
VRK3-203ENST00000424804 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 FBXL8Q96CD0 374 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 MCMBPQ9BTE3 642 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 TSPYL1Q9H0U9 437 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 OARD1Q9Y530 152 aa12.23□□□□□ -0.45
VRK3-203ENST00000424804 OR5H15A6NDH6 313 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 WFS1O76024 890 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 SEC24DO94855 1032 aaPredicted RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 WDR47O94967 919 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 NPPBP16860 134 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 BCL6P41182 706 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 C18orf21Q32NC0 220 aaPredicted RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 TEX35Q5T0J7 233 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 PLAG1Q6DJT9 500 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 CPEB2Q7Z5Q1 589 aaKnown RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 ANKRD37Q7Z713 158 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 TMPRSS11BQ86T26 416 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 GPSM1Q86YR5 675 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
VRK3-203ENST00000424804 KCT2Q8NC54 265 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 LRRN4CLQ8ND94 238 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 OR51Q1Q8NH59 317 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 ZCCHC10Q8TBK6 192 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 SGPP1Q9BX95 441 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 FAM129AQ9BZQ8 928 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 DERL2Q9GZP9 239 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 LANCL2Q9NS86 450 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 STMN3Q9NZ72 180 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 WWOXQ9NZC7 414 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 CD274Q9NZQ7 290 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 RNF112Q9ULX5 631 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms