RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 WFIKKN1Q96NZ8 548 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 ALS2CR12Q96Q35 445 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 FICDQ9BVA6 458 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 TSSK1BQ9BXA7 367 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 MAK16Q9BXY0 300 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SLC6A15Q9H2J7 730 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SH2D2AQ9NP31 389 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 SACM1LQ9NTJ5 587 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 TMEM160Q9NX00 188 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 KLHL8Q9P2G9 620 aaPredicted RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 YARS2Q9Y2Z4 477 aaKnown RBP5.84□□□□□ -1.47
SDCBP-203ENST00000424270 PCDHA13Q9Y5I0 950 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 ATP6V1DQ9Y5K8 247 aa5.84□□□□□ -1.47
SDCBP-203ENST00000424270 UQCRHLA0A096LP55 91 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 A0A0U1RQJ8 604 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 FAM234BA2RU67 622 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF860A6NHJ4 632 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 SAGE2PA6NJ88 616 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 KDM4EB2RXH2 506 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TMCC2O75069 709 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TRAPPC6AO75865 159 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 OR2J2O76002 312 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 GLSO94925 669 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 OR6B1O95007 311 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 NSA2O95478 260 aaKnown RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 FHP07954 510 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PAX1P15863 534 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 NFKB1P19838 968 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 CRYGSP22914 178 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ACRV1P26436 265 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 CDKN1AP38936 164 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 MC3RP41968 323 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ARHGAP25P42331 645 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 KLK7P49862 253 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 FAM53BQ14153 422 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 DPYSL3Q14195 570 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PIGHQ14442 188 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PDK1Q15118 436 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TMED2Q15363 201 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TOMM20Q15388 145 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 SLC14A2Q15849 920 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PHKG1Q16816 387 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 GPR33Q49SQ1 333 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ODF2Q5BJF6 829 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 FAM120AOSQ5T036 256 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ALKBH2Q6NS38 261 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 LYPD8Q6UX82 237 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ZNF704Q6ZNC4 412 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 RTL4Q6ZR62 310 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PRSS41Q7RTY9 318 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 RFLNBQ8N5W9 214 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 MCUQ8NE86 351 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 OR13C4Q8NGS5 318 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 SYN2Q92777 582 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 RAD51AP1Q96B01 352 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 C1orf159Q96HA4 380 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ART5Q96L15 291 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TEKT5Q96M29 485 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 KRT12Q99456 494 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 WDR83Q9BRX9 315 aaKnown RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 SLCO5A1Q9H2Y9 848 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 LIN28AQ9H9Z2 209 aaKnown RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 ENAMQ9NRM1 1142 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TUBA8Q9NY65 449 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 TTC7AQ9ULT0 858 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 BOKQ9UMX3 212 aaPredicted RBP5.83□□□□□ -1.48
SDCBP-203ENST00000424270 PCDHGB3Q9Y5G1 929 aa5.83□□□□□ -1.48
SDCBP-203ENST00000424270 LOC285095A0A1B0GVY8 99 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 OR2A25A4D2G3 310 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 C5orf60A6NFR6 353 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PSMD12O00232 456 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 WWP2O00308 870 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 P2RX6O15547 441 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 SIAH2O43255 324 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 SSX4O60224 188 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 AVILO75366 819 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 ZFAND5O76080 213 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 MYO1DO94832 1006 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 CCNDBP1O95273 360 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 IL18BPO95998 194 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 APOA4P06727 396 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 EZRP15311 586 aaKnown RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 ENDOUP21128 410 aaKnown RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 GDF1P27539 372 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 BCL6P41182 706 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 SOX3P41225 446 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 BDKRB1P46663 353 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 CDKN1CP49918 316 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 NUDT6P53370 316 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PRR20EP86478 221 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PRR20CP86479 221 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PRR20DP86480 221 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PRR20BP86481 221 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 PRR20AP86496 221 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 MEF2AQ02078 507 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 RHAGQ02094 409 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 FAPQ12884 760 aa5.82□□□□□ -1.48
SDCBP-203ENST00000424270 SLC10A2Q12908 348 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-203ENST00000424270 THEMIS2Q5TEJ8 643 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms