RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 TBC1D19Q8N5T2 526 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 CPT1CQ8TCG5 803 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 EXT2Q93063 718 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 PEX11GQ96HA9 241 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 VPS50Q96JG6 964 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 FMO2Q99518 471 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 WDR77Q9BQA1 342 aaPredicted RBP16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 RBCK1Q9BYM8 510 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 SNX15Q9NRS6 342 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 DNAJC11Q9NVH1 559 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 GPRC5BQ9NZH0 403 aa16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 MTRF1LQ9UGC7 380 aaKnown RBP16.83■□□□□ 0.28
SBDSP1-202ENST00000423945 IGHV3-20A0A0C4DH32 117 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 UBXN8O00124 270 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 PCDH17O14917 1159 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 CHST10O43529 356 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 KLHL41O60662 606 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 ACSL3O95573 720 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 ALDOAP04075 364 aaKnown RBP16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 C8orf89P0DMQ9 161 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 SOX11P35716 441 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 HNF4AP41235 474 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 AGTR2P50052 363 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 RAB8AP61006 207 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 RGS1Q08116 209 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 MINDY4Q4G0A6 757 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 CRB2Q5IJ48 1285 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 TOR1AIP1Q5JTV8 583 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 AGAP7PQ5VUJ5 663 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 TBC1D1Q86TI0 1168 aaPredicted RBP16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 CUZD1Q86UP6 607 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 TRPV3Q8NET8 790 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 KIF18AQ8NI77 898 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 STAG3L4Q8TBR4 150 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 WDR34Q96EX3 536 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 AGAP4Q96P64 663 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 GPR78Q96P69 363 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 CD244Q9BZW8 370 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 NUDT4Q9NZJ9 180 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 ZNF490Q9ULM2 529 aaPredicted RBP16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 B3GNT3Q9Y2A9 372 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 ACOT9Q9Y305 439 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 COL12A1Q99715 3063 aa16.82■□□□□ 0.28
SBDSP1-202ENST00000423945 KERAO60938 352 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 SERPINA7P05543 415 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 SERPINA6P08185 405 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 CYC1P08574 325 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 ITGAMP11215 1152 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 HNRNPH1P31943 449 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 PHBP35232 272 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 DOC2AQ14183 400 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 E2F2Q14209 437 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 UAP1Q16222 522 aaPredicted RBP16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 PDK4Q16654 411 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 ANKRD37Q7Z713 158 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 KBTBD2Q8IY47 623 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 ZADH2Q8N4Q0 377 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 LRRN4CLQ8ND94 238 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 PLPP5Q8NEB5 264 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 BRIX1Q8TDN6 353 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 SLC44A1Q8WWI5 657 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 TSLPQ969D9 159 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 C19orf60Q96EN9 201 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 EHD1Q9H4M9 534 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 NT5DC2Q9H857 520 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 CNOT10Q9H9A5 744 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 SLAMF7Q9NQ25 335 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 RIC8BQ9NVN3 520 aa16.81■□□□□ 0.28
SBDSP1-202ENST00000423945 A0A087X1B8 175 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CLEC18AA5D8T8 446 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CCNT2O60583 730 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CDC123O75794 336 aaPredicted RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 SEC24DO94855 1032 aaPredicted RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 MAGEA12P43365 314 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 UQCRFS1P47985 274 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 MFAP5Q13361 173 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 MFSD4BQ5TF39 518 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CLEC18BQ6UXF7 455 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 ISLR2Q6UXK2 745 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 LINC00696Q6ZRV3 163 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CEP128Q6ZU80 1094 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 ABHD13Q7L211 337 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 SIRT6Q8N6T7 355 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CLEC18CQ8NCF0 446 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 PPP4R1Q8TF05 950 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 UBTD2Q8WUN7 234 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 ISL2Q96A47 359 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 SNRNP40Q96DI7 357 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 OR1F2PQ96R84 312 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 CAPS2Q9BXY5 557 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 PTGFRNQ9P2B2 879 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 PCDHGA10Q9Y5H3 936 aa16.8■□□□□ 0.28
SBDSP1-202ENST00000423945 RP1L1Q8IWN7 2480 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms