RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 RDH10Q8IZV5 341 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 RBFAQ8N0V3 343 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CAMKK1Q8N5S9 505 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 DOCK3Q8IZD9 2030 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CCNB2O95067 398 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 ANXA5P08758 320 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CLEC2LP0C7M8 214 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CCNYL3P0C7X3 344 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 ITPKAP23677 461 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 POU1F1P28069 291 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 HOXC8P31273 242 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 OR3A3P47888 321 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 SELENOWP63302 87 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 ARF5P84085 180 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 FAPQ12884 760 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 NFATC2Q13469 925 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 RGNQ15493 299 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 ANGPTL8Q6UXH0 198 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CERS6Q6ZMG9 384 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 MSANTD1Q6ZTZ1 278 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 PTCHD4Q6ZW05 846 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 ABI3BPQ7Z7G0 1075 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 VWA5B2Q8N398 1253 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 OR4M1Q8NGD0 313 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 REPS1Q96D71 796 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 FRMD6Q96NE9 622 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 FAM129BQ96TA1 746 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 MIXL1Q9H2W2 232 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 RERGLQ9H628 205 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 RNF121Q9H920 327 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 PADI3Q9ULW8 664 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 PCDHB8Q9UN66 801 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 CMAHPQ9Y471 501 aa16.03■□□□□ 0.16
NPC1L1-203ENST00000423141 SMLR1H3BR10 107 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 ALPPP05187 535 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 SCG5P05408 212 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 SRCP12931 536 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 RPS3P23396 243 aaKnown RBP eCLIP16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 CNR2P34972 360 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 ABRQ12979 859 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 GANABQ14697 944 aaKnown RBP16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 COX20Q5RI15 118 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 KRT73Q86Y46 540 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 NLGN4YQ8NFZ3 816 aaPredicted RBP16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 ANGPTL6Q8NI99 470 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 ZFAND1Q8TCF1 268 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 MAP6Q96JE9 813 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 CRISPLD1Q9H336 500 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 IL26Q9NPH9 171 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 RHCGQ9UBD6 479 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 ALPK3Q96L96 1907 aa16.02■□□□□ 0.16
NPC1L1-203ENST00000423141 PLA2G10O15496 165 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 ENTPD6O75354 484 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 RHOCP08134 193 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 CHRM5P08912 532 aaPredicted RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 FEN1P39748 380 aaKnown RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 MLLT3P42568 568 aaPredicted RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 SRSF11Q05519 484 aaKnown RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 LARS2Q15031 903 aaKnown RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 PAQR6Q6TCH4 344 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 ZNF852Q6ZMS4 543 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 WDR53Q7Z5U6 358 aaPredicted RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 FAM9CQ8IZT9 166 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 ZNF557Q8N988 423 aaPredicted RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 TCF25Q9BQ70 676 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 TTLL2Q9BWV7 592 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 GON7Q9BXV9 100 aa16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 LSM2Q9Y333 95 aaKnown RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 DNMT3AQ9Y6K1 912 aaPredicted RBP16.02■□□□□ 0.15
NPC1L1-203ENST00000423141 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 PLD2O14939 933 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 CSO75390 466 aaKnown RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 ARHGEF15O94989 841 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 PRPH2P23942 346 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 CPT1AP50416 773 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 CDC42P60953 191 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 NKX3-2P78367 333 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 SEMG2Q02383 582 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 TEKQ02763 1124 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 DDX39BQ13838 428 aaKnown RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 DGKKQ5KSL6 1271 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 SLC35F1Q5T1Q4 408 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 FRG2Q64ET8 278 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 SAXO2Q658L1 398 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 NCEH1Q6PIU2 408 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 WDFY2Q96P53 400 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 FRG2BQ96QU4 278 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 MTERF1Q99551 399 aaKnown RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 RDH14Q9HBH5 336 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 C11orf16Q9NQ32 467 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 SLC22A14Q9Y267 594 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 PRG3Q9Y2Y8 225 aaPredicted RBP16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 C1orf226A1L170 272 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 SLC35F4A4IF30 521 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 ACSL4O60488 711 aa16.01■□□□□ 0.15
NPC1L1-203ENST00000423141 CDRT1O95170 752 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms