RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR5K4A6NMS3 321 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 TLR4O00206 839 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 RTCAO00442 366 aaKnown RBP20.03■□□□□ 0.8
GPC1-202ENST00000420138 CCNDBP1O95273 360 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 VIPP01282 170 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 PEX2P28328 305 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 HYAL2Q12891 473 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 PDE7AQ13946 482 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 FAM71E1Q6IPT2 247 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 CYP2R1Q6VVX0 501 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 DHFR2Q86XF0 187 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.03■□□□□ 0.8
GPC1-202ENST00000420138 STARD8Q92502 1023 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 OR2A14Q96R47 310 aa20.03■□□□□ 0.8
GPC1-202ENST00000420138 NME1P15531 152 aaKnown RBP20.02■□□□□ 0.8
GPC1-202ENST00000420138 HRH2P25021 359 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 GRIA3P42263 894 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 MC1RQ01726 317 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 RHDQ02161 417 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 KIR2DS3Q14952 304 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 LRRC36Q1X8D7 754 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 ZNF385BQ569K4 471 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 OGFRL1Q5TC84 451 aaPredicted RBP20.02■□□□□ 0.8
GPC1-202ENST00000420138 PAQR7Q86WK9 346 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 IFNEQ86WN2 208 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 TRIM48Q8IWZ4 208 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 ZUFSPQ96AP4 578 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 LRGUKQ96M69 825 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 ZNF583Q96ND8 569 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 REEP4Q9H6H4 257 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 ACTR3BQ9P1U1 418 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 USP34Q70CQ2 3546 aa20.02■□□□□ 0.8
GPC1-202ENST00000420138 TP53BP1Q12888 1972 aaPredicted RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 PRSS51A0A1B0GVH4 220 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 TMEM221A6NGB7 291 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 M0R296 226 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 ARPC2O15144 300 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 LAMTOR5O43504 91 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 GSNP06396 782 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 HTR1EP28566 365 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 HOXA6P31267 233 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 OR4D2P58180 307 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 TAS2R50P59544 299 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 MRPS35P82673 323 aaKnown RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 PLCL1Q15111 1095 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 SFT2D3Q587I9 215 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 LCN8Q6JVE9 175 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 TMEFF1Q8IYR6 380 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 CLECL1Q8IZS7 167 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 TTLQ8NG68 377 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 SLC22A18Q96BI1 424 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 DUS3LQ96G46 650 aaKnown RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 KCTD14Q9BQ13 255 aaPredicted RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 CPPED1Q9BRF8 314 aaPredicted RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 DUSP26Q9BV47 211 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 MIR1-1HGQ9H1L0 117 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 FAM120CQ9NX05 1096 aaKnown RBP20.02■□□□□ 0.79
GPC1-202ENST00000420138 SNX7Q9UNH6 387 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 MAPRE3Q9UPY8 281 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 AP1M2Q9Y6Q5 423 aa20.02■□□□□ 0.79
GPC1-202ENST00000420138 CCDC163A0A0D9SF12 145 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 OR6C74A6NCV1 312 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 LRIT2A6NDA9 550 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 PPM1DO15297 605 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 NDUFS4O43181 175 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 C1QCP02747 245 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 FURINP09958 794 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 UGT2B7P16662 529 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 HPCAL1P37235 193 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 FNTBP49356 437 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 CYP4F3Q08477 520 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 DUOXA1Q1HG43 343 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 PRSS53Q2L4Q9 553 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 ADPRMQ3LIE5 342 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 CPTPQ5TA50 214 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 TRIM73Q86UV7 250 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 C10orf111Q8N326 155 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 DNASE2BQ8WZ79 361 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 NELL1Q92832 810 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 SLCO4A1Q96BD0 722 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 AURKBQ96GD4 344 aaPredicted RBP20.01■□□□□ 0.79
GPC1-202ENST00000420138 PIF1Q9H611 641 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 PRMT8Q9NR22 394 aaPredicted RBP20.01■□□□□ 0.79
GPC1-202ENST00000420138 AHSPQ9NZD4 102 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.01■□□□□ 0.79
GPC1-202ENST00000420138 PCDHGA4Q9Y5G9 962 aa20.01■□□□□ 0.79
GPC1-202ENST00000420138 C4orf51C9J302 202 aa20■□□□□ 0.79
GPC1-202ENST00000420138 RFXANKO14593 260 aa20■□□□□ 0.79
GPC1-202ENST00000420138 STAMBPO95630 424 aa20■□□□□ 0.79
GPC1-202ENST00000420138 POLR2CP19387 275 aaPredicted RBP20■□□□□ 0.79
GPC1-202ENST00000420138 GRK3P35626 688 aa20■□□□□ 0.79
GPC1-202ENST00000420138 AHRP35869 848 aa20■□□□□ 0.79
GPC1-202ENST00000420138 TRPC1P48995 793 aa20■□□□□ 0.79
GPC1-202ENST00000420138 NXPH1P58417 271 aa20■□□□□ 0.79
GPC1-202ENST00000420138 MPEG1Q2M385 716 aa20■□□□□ 0.79
GPC1-202ENST00000420138 MMP21Q8N119 569 aa20■□□□□ 0.79
GPC1-202ENST00000420138 TMEM132CQ8N3T6 1108 aa20■□□□□ 0.79
GPC1-202ENST00000420138 AMER3Q8N944 861 aa20■□□□□ 0.79
GPC1-202ENST00000420138 FAM46DQ8NEK8 389 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms