RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ABHD18Q0P651 414 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 LAIR1Q6GTX8 287 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ERVK-6Q9BXR3 956 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 HDAC8Q9BY41 377 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 DERL2Q9GZP9 239 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MYOCOSA0A1B0GUC4 107 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 CST1P01037 141 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZCCHC18P0CG32 403 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ALOX12P18054 663 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MPLP40238 635 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 TBPL1P62380 186 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 CD47Q08722 323 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF846Q147U1 533 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 NKAIN2Q5VXU1 208 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 FAM160A2Q8N612 972 aaPredicted RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 OR52E4Q8NGH9 312 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MOAP1Q96BY2 351 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 MECRQ9BV79 373 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 EIF3KQ9UBQ5 218 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 C3orf18Q9UK00 162 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 IRAK3Q9Y616 596 aa16.34■□□□□ 0.21
SYNGAP1-202ENST00000418600 C1GALT1C1LP0DN25 315 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 BCAP31P51572 246 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 BST1Q10588 318 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 ZNF77Q15935 545 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 SLC35A5Q9BS91 424 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 ARMCX1Q9P291 453 aa16.33■□□□□ 0.21
SYNGAP1-202ENST00000418600 GLOD5A6NK44 160 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 RBMXL2O75526 392 aaKnown RBP16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 SHBGP04278 402 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 BPGMP07738 259 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 GDF1P27539 372 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 CCNIQ14094 377 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 KIR2DS3Q14952 304 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 OR4C6Q8NH72 309 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 SETD6Q8TBK2 473 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 CD244Q9BZW8 370 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 CNTN6Q9UQ52 1028 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 STX16-NPEPL1H3BU86 382 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 STX16O14662 325 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 OR1I1O60431 355 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 HLA-FP30511 346 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 CBX5P45973 191 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ZNF84P51523 738 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ZNF311Q5JNZ3 666 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 CATSPEREQ5SY80 951 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 GALNT12Q8IXK2 581 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 UTP23Q9BRU9 249 aaKnown RBP16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 TRIM2Q9C040 744 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 IL1RAPQ9NPH3 570 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ATXN10Q9UBB4 475 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 TBX1O43435 398 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 HCRTR2O43614 444 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ASB6Q9NWX5 421 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 MAGEL2Q9UJ55 1249 aa16.33■□□□□ 0.2
SYNGAP1-202ENST00000418600 ZNF487B1APH4 448 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 CPNE3O75131 537 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 TNFSF15O95150 251 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SCAPQ12770 1279 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SMCO1Q147U7 214 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SCML4Q8N228 414 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 KBTBD8Q8NFY9 601 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 NLGN4YQ8NFZ3 816 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 HAVCR1Q96D42 359 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 FCRL4Q96PJ5 515 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 TIMM29Q9BSF4 260 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SMURF2Q9HAU4 748 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 NARSO43776 548 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 MATN1P21941 496 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 HOXD13P35453 343 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SLAMF1Q13291 335 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 IFT27Q9BW83 186 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 FAM192AQ9GZU8 254 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 FAM86C1Q9NVL1 165 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 A0A1W2PRG6 482 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 MANBAO00462 879 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 FLRT2O43155 660 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 TPST2O60704 377 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 DPYSQ14117 519 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 RFX4Q33E94 735 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SHISA6Q6ZSJ9 500 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 ANKFN1Q8N957 763 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 PGM2Q96G03 612 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 USB1Q9BQ65 265 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SOX17Q9H6I2 414 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 ZBTB20Q9HC78 741 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 LNX2Q8N448 690 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 BHLHE22Q8NFJ8 381 aaPredicted RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 PIWIL1Q96J94 861 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 RASSF1Q9NS23 344 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 PRPS1L1P21108 318 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 DSTNP60981 165 aa16.32■□□□□ 0.2
SYNGAP1-202ENST00000418600 SHC2P98077 582 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms