RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 IPO11Q9UI26 975 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MOSPD1Q9UJG1 213 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 AJAP1Q9UKB5 411 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 ERGIC3Q9Y282 383 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 NTNG1Q9Y2I2 539 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 DERAQ9Y315 318 aa5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 CAB39Q9Y376 341 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 TMEM184BQ9Y519 407 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 FLNAP21333 2647 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-206ENST00000417628 MEGF8Q7Z7M0 2845 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CUBNO60494 3623 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 RP1P56715 2156 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DOCK9Q9BZ29 2069 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 EDDM13A0A1B0GTR0 161 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PIPSLA2A3N6 862 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 TARM1B6A8C7 271 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 K7ENM7 598 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MASP2O00187 686 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CLDN3O15551 220 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PHGDHO43175 533 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DENRO43583 198 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CDH16O75309 829 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CREG1O75629 220 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CEACAM4O75871 244 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 USP1O94782 785 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 TOX4O94842 621 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CPNE6O95741 557 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 WDPCPO95876 746 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 GASTP01350 101 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 IL1BP01584 269 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 KRT1P04264 644 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 IFNA16P05015 189 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ZDHHC11BP0C7U3 371 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MED14OSP0DP75 135 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF23P17027 643 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PI3P19957 117 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DDCP20711 480 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 AGAP20933 346 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 FPR1P21462 350 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ATP5C1P36542 298 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PAFAH1B1P43034 410 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 NPTX2P47972 431 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ALDH3B2P48448 385 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 STARP49675 285 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CLK3P49761 638 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 RRADP55042 308 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 IFITM2Q01629 132 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 TRA2AQ13595 282 aaKnown RBP eCLIP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ATP1A4Q13733 1029 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PDE1CQ14123 709 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 KCNAB1Q14722 419 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 LRRC36Q1X8D7 754 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 GTDC1Q4AE62 458 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 AGBL4Q5VU57 503 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 PRMT9Q6P2P2 845 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 UGT2A3Q6UWM9 527 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 BTN2A1Q7KYR7 527 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 SLFN11Q7Z7L1 901 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 GSPT2Q8IYD1 628 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 LRRC34Q8IZ02 419 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DNAAF3Q8N9W5 541 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ACBD4Q8NC06 268 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 RFWD2Q8NHY2 731 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CDC26Q8NHZ8 85 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 KBTBD7Q8WVZ9 684 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 THAP4Q8WY91 577 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 KLK6Q92876 244 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 GCDHQ92947 438 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 HS6ST2Q96MM7 605 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 TSNARE1Q96NA8 513 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DOK1Q99704 481 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ZPBPQ9BS86 351 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 HOXD1Q9GZZ0 328 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ENKD1Q9H0I2 346 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ING2Q9H160 280 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 WNT5BQ9H1J7 359 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 RDH14Q9HBH5 336 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MAGEE1Q9HCI5 957 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 LANCL2Q9NS86 450 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 FGF21Q9NSA1 209 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ASNSD1Q9NWL6 643 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DPP3Q9NY33 737 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MALT1Q9UDY8 824 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 ADAM29Q9UKF5 820 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 CDH9Q9ULB4 789 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 MED16Q9Y2X0 877 aa5.29□□□□□ -1.56
ECHDC1-206ENST00000417628 DIDO1Q9BTC0 2240 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 C15orf38-AP3S2A0A0A6YYH1 394 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 IGHV5-10-1A0A0J9YXX1 117 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 TYW5A2RUC4 315 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 ARGFXA6NJG6 315 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC9B1P1A6NJY1 282 aa5.28□□□□□ -1.56
ECHDC1-206ENST00000417628 DBX1A6NMT0 343 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms